Factsheet for HORVU1Hr1G007800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G087220.1	Barley	cytosol	80.71	80.93
HORVU7Hr1G079380.2	Barley	cytosol	81.79	80.91
Zm00001d024314_P001	Maize	cytosol	73.64	75.49
Os10t0430200-01	Rice	cytosol	74.73	75.14
Os08t0270400-00	Rice	cytosol	60.33	73.03
OQU80077	Sorghum	cytosol	73.64	72.65
HORVU6Hr1G032760.3	Barley	cytosol	47.83	58.86
HORVU5Hr1G062030.9	Barley	cytosol	56.52	54.03
HORVU2Hr1G099360.1	Barley	cytosol	10.6	53.42
HORVU2Hr1G010840.1	Barley	peroxisome	51.9	53.35
HORVU3Hr1G097140.1	Barley	cytosol	48.1	49.72
HORVU0Hr1G012860.2	Barley	plastid	56.79	49.64
HORVU3Hr1G097160.1	Barley	cytosol	45.92	47.74
HORVU6Hr1G035420.6	Barley	cytosol	44.84	45.33
HORVU2Hr1G010830.1	Barley	peroxisome	51.63	44.29
HORVU6Hr1G035410.1	Barley	cytosol	7.07	41.94
HORVU3Hr1G097060.1	Barley	cytosol, plastid	17.12	41.18
HORVU0Hr1G012940.6	Barley	cytosol	42.66	39.85
HORVU2Hr1G099350.2	Barley	cytosol, mitochondrion	21.74	19.9

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	UniProt:A0A287EK80	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EnsemblPlantsGene:HORVU1Hr1G007800
EnsemblPlants:HORVU1Hr1G007800.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059
PANTHER:PTHR42683	PANTHER:PTHR42683:SF26	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000B46A425
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:16446297..16448141

Molecular Weight (calculated)

38656.2 Da

IEP (calculated)

7.716

GRAVY (calculated)

0.132

Length

368 amino acids

Sequence
(BLAST)

001: MTARKAVGLA ALESSGHLSP LAITRRSTGA EDVAIKILYC GICHSDLHSI KNEWKNARYP MIPGHEIAGE VSEVGKKVTR FAAGDRVGVG CMVNSCGSCE
101: SCAKGCENHC PAMAFTYNSF DDSGSGTNAV TYGGYSSMVV VKERFVVRFP EAMPLDKGAP LLCAGITVYS PMKHHGLNIP GLHLGVVGLG GLGHMAVKFG
201: KAFGMKVTVI SSSPGKKEEA LGRLGADAFV VSNNADEMKA AMSTMDGIIN TVSANMPIAP LLGLLKPNGK MVMVGLPENS IQLPPFALVA TNKTLAGSCM
301: GGMSETQEML DLAAKHGVTA DIEVIRADYV NTAMDRLAKA DVRYRFVIDI GNTLQKAITE AADLLTAA

Best Arabidopsis Sequence Match ( AT4G37970.1 )
(BLAST)

001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS

Arabidopsis Description

CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.