Factsheet for HORVU0Hr1G012940.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G202700.1	Wheat	cytosol	65.48	72.47
TraesCS5A01G205700.1	Wheat	cytosol	64.97	71.91
TraesCS5D01G210600.1	Wheat	cytosol	64.47	71.35
Zm00001d020400_P001	Maize	plastid	56.35	60.82
EER96708	Sorghum	cytosol	55.08	60.28
EER98869	Sorghum	cytosol	55.33	60.22
Os09t0399800-01	Rice	cytosol	54.31	59.61
HORVU6Hr1G032760.3	Barley	cytosol	45.18	59.53
HORVU5Hr1G062030.9	Barley	cytosol	58.12	59.48
Os09t0400400-01	Rice	cytosol	54.31	59.12
GSMUA_Achr9P27270_001	Banana	cytosol	44.67	49.58
HORVU0Hr1G012860.2	Barley	plastid	52.03	48.69
HORVU6Hr1G035410.1	Barley	cytosol	7.11	45.16
HORVU3Hr1G097060.1	Barley	cytosol, plastid	17.51	45.1
HORVU6Hr1G087220.1	Barley	cytosol	41.12	44.14
HORVU7Hr1G079380.2	Barley	cytosol	40.86	43.28
HORVU1Hr1G007800.1	Barley	cytosol	39.85	42.66
HORVU2Hr1G010840.1	Barley	peroxisome	38.32	42.18
HORVU3Hr1G097140.1	Barley	cytosol	36.04	39.89
HORVU3Hr1G097160.1	Barley	cytosol	35.79	39.83
HORVU6Hr1G035420.6	Barley	cytosol	36.04	39.01
HORVU2Hr1G099360.1	Barley	cytosol	7.11	38.36
HORVU2Hr1G010830.1	Barley	peroxisome	38.32	35.2
HORVU2Hr1G099350.2	Barley	cytosol, mitochondrion	10.91	10.7

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	UniProt:A0A287E0M0	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	EnsemblPlantsGene:HORVU0Hr1G012940	EnsemblPlants:HORVU0Hr1G012940.6	InterPro:NAD(P)-bd_dom_sf
PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF15	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000B478E03	SEG:seg	:	:

Description

No Description!

Coordinates

chrchrUn:+:74587459..74589376

Molecular Weight (calculated)

42571.6 Da

IEP (calculated)

9.959

GRAVY (calculated)

-0.481

Length

394 amino acids

Sequence
(BLAST)

001: MEKGTPALGW AARDESGLLS PYSFSRRARK DEDVTIKVLF CGICHTDLHI AKNEWGNALY PIVPGHEIVG VVTDVGPGVK SFKVGDTVGV GYFVDSCRSC
101: GTCSKGYENY CSTLVLTSNG VDYDGATTQG GFSDVLVVNQ DYVLRVPESL SLAGAAPLLC AGVTVYSPMM QYGLNAPGKH LGVVGLGGLG HMAVKFGKAF
201: GMTVTVISSS PRKREEALER LGADAFLVSQ DAEQMKGCGG DDGRHHRHGV GGAPARATAG ADEADGADGG GRRAERAPGA ASLRHHRRRQ ALGRERRGQR
301: ARLPGDAGLR GEARHHRGRR GRQDGLRQHG GRAAGEERRE VPLRHRRRRQ PAGRRRLVLR DVDTQRSPAT WGRDTWSCYF HGSVCVYFQN FLVK

Best Arabidopsis Sequence Match ( AT4G37970.2 )
(BLAST)

001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKVRNLKPF INYANKT

Arabidopsis Description

CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.