CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98869	Sorghum	cytosol	82.78	82.32
TraesCS5B01G202700.1	Wheat	cytosol	80.83	81.74
TraesCS5D01G210600.1	Wheat	cytosol	80.56	81.46
TraesCS5A01G205700.1	Wheat	cytosol	80.28	81.18
HORVU6Hr1G032760.3	Barley	cytosol	66.67	80.27
Os09t0400400-01	Rice	cytosol	80.0	79.56
Os09t0399800-01	Rice	cytosol	77.78	77.99
TraesCS7A01G183000.1	Wheat	cytosol	76.94	77.59
TraesCS7D01G184500.1	Wheat	cytosol	76.11	76.75
EER98870	Sorghum	cytosol	20.83	76.53
TraesCS5D01G218100.2	Wheat	plastid	82.22	76.29
TraesCS7D01G184600.1	Wheat	cytosol	42.78	76.24
TraesCS5A01G213900.1	Wheat	plastid	81.39	75.32
TraesCS5B01G209800.2	Wheat	plastid	81.11	75.06
HORVU5Hr1G062030.9	Barley	cytosol	79.72	74.55
GSMUA_Achr9P27270_001	Banana	cytosol	63.89	64.79
OQU89465	Sorghum	plastid	75.0	64.59
AT4G37980.1	Thale cress	cytosol	60.83	61.34
CDX69348	Canola	cytosol	60.0	60.5
CDX75688	Canola	cytosol	59.72	60.22
Bra010626.1-P	Field mustard	cytosol	57.78	60.12
Solyc11g011330.1.1	Tomato	cytosol	59.44	60.11
CDY52520	Canola	cytosol	43.89	60.08
VIT_00s0371g00100.t01	Wine grape	cytosol	60.28	59.94
Bra011799.1-P	Field mustard	cytosol	59.44	59.94
CDX90392	Canola	cytosol	59.44	59.94
Solyc11g011340.1.1	Tomato	cytosol	59.44	59.61
PGSC0003DMT400040520	Potato	cytosol	50.83	59.61
VIT_00s0346g00080.t01	Wine grape	cytosol	59.72	59.39
CDX90391	Canola	cytosol	58.06	59.21
CDY52519	Canola	cytosol	58.06	59.21
VIT_00s0346g00110.t01	Wine grape	cytosol	59.17	59.17
VIT_00s0371g00050.t01	Wine grape	cytosol	59.17	59.17
Bra010625.1-P	Field mustard	cytosol	42.22	59.14
AT4G37990.1	Thale cress	cytosol	58.89	59.05
KRH74457	Soybean	cytosol	58.33	58.5
Bra010627.1-P	Field mustard	cytosol	54.72	58.46
VIT_00s0615g00020.t01	Wine grape	cytosol	58.33	58.33
VIT_00s0371g00040.t01	Wine grape	cytosol	36.39	58.22
VIT_00s0346g00100.t01	Wine grape	cytosol	58.33	58.17
VIT_00s0346g00120.t01	Wine grape	cytosol	58.33	58.17
VIT_00s0615g00010.t01	Wine grape	cytosol	58.06	58.06
PGSC0003DMT400040518	Potato	cytosol	57.22	57.87
VIT_00s1389g00010.t01	Wine grape	cytosol	57.78	57.78
PGSC0003DMT400013704	Potato	cytosol	56.94	57.58
VIT_00s0371g00060.t01	Wine grape	cytosol	47.78	57.33
KRH74456	Soybean	cytosol	57.5	57.18
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	59.44	56.91
PGSC0003DMT400080827	Potato	cytosol	33.33	56.6
KRH39488	Soybean	cytosol	56.94	56.32
Solyc11g010960.1.1	Tomato	cytosol	55.83	55.99
OQU80077	Sorghum	cytosol	57.78	55.76
PGSC0003DMT400041566	Potato	cytosol	55.56	55.71
PGSC0003DMT400041563	Potato	cytosol	38.33	55.65
CDX69347	Canola	cytosol	55.56	55.25
Solyc11g010990.1.1	Tomato	cytosol	55.0	55.15
PGSC0003DMT400041578	Potato	cytosol	55.28	55.12
HORVU0Hr1G012940.6	Barley	cytosol	60.28	55.08
KRH07586	Soybean	cytosol	44.17	55.02
Solyc11g010980.1.1	Tomato	cytosol	54.72	54.87
KRG99878	Soybean	cytosol	55.0	54.85
Bra011798.1-P	Field mustard	cytosol	55.0	54.7
CDX75687	Canola	cytosol	55.0	54.7
VIT_00s0371g00020.t01	Wine grape	cytosol	8.33	54.55
AT4G37970.1	Thale cress	cytosol	55.0	54.55
PGSC0003DMT400041573	Potato	cytosol	48.61	54.52
PGSC0003DMT400043757	Potato	cytosol	17.5	54.31
VIT_00s0371g00010.t01	Wine grape	cytosol	10.56	54.29
EES10404	Sorghum	cytosol	54.44	54.14
VIT_00s0218g00010.t01	Wine grape	cytosol	55.0	53.95
VIT_10s0003g04910.t01	Wine grape	cytosol	53.89	53.44
VIT_00s0615g00030.t01	Wine grape	cytosol	58.06	52.51
OQU82308	Sorghum	cytosol	55.28	52.37
KRH45510	Soybean	cytosol	43.06	52.36
PGSC0003DMT400024954	Potato	cytosol	38.61	51.87
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	23.33	51.85
PGSC0003DMT400024956	Potato	cytosol	17.22	51.67
KRH39487	Soybean	cytosol	44.44	51.61
KXG29649	Sorghum	cytosol	51.67	50.96
CDY63551	Canola	cytosol	9.44	50.75
EER88002	Sorghum	cytosol	48.89	49.72
EER88001	Sorghum	cytosol	48.61	49.44
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	46.11	49.11
OQU75993	Sorghum	cytosol	48.06	48.87
KRH45566	Soybean	cytosol	41.39	48.85
KRH49728	Soybean	cytosol	29.17	47.95
PGSC0003DMT400041571	Potato	cytosol	17.78	46.04
OQU79199	Sorghum	cytosol	40.83	45.65
KRH45514	Soybean	cytosol	32.78	44.87
Solyc05g024320.1.1	Tomato	cytosol	25.83	43.87
VIT_00s0371g00070.t01	Wine grape	cytosol	44.17	43.56
KXG19525	Sorghum	cytosol	47.78	41.15
VIT_18s0001g01160.t01	Wine grape	mitochondrion	17.78	39.75
OQU75994	Sorghum	cytosol	16.67	33.52
PGSC0003DMT400043759	Potato	cytosol	7.5	30.34

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	EntrezGene:8056235	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	UniProt:C5XC51	EnsemblPlants:EER96708	ProteinID:EER96708	ProteinID:EER96708.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF15	SMART:SM00829	EnsemblPlantsGene:SORBI_3002G195600
SUPFAM:SSF50129	SUPFAM:SSF51735	unigene:Sbi.3123	UniParc:UPI0001A83B0F	RefSeq:XP_002460187.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:58404433..58406373

Molecular Weight (calculated)

37494.2 Da

IEP (calculated)

5.809

GRAVY (calculated)

0.243

Length

360 amino acids

Sequence
(BLAST)

001: MEQVSKAALG WAARDASGHL SPYSFSRVLR DGDVTIKVLF CGVCHTDLHI IKNEWGNALY PVVPGHEVVG VVTDVGAGVT KFKAGDTVGV GYFIDSCRTC
101: ESCSTGHENY CPDLVLTSNG VARDGGVTTT TTTQGGFSDV VVVDQHYVVR VPASLPPDGA APLLCAGVTV YSPMVEYGLN VPGKRLGVVG LGGLGHIAVK
201: FGKAFGMAVT VISSSPAKRG EAIERLGADE FLVSRDTEQM KAAAGTMDGI IDTVSAGHPI VPLLALLKPM GQMVIVGAPS TPLELPAYAI ITGGKRVAGN
301: GVGSIADCQA MLDFAGQHGI TADIELVRMD YVNTAMERLE RNDVRYRFVV DVAGSLGAAA

Best Arabidopsis Sequence Match ( AT4G37980.1 )
(BLAST)

001: MGKVLEKEAF GLAAKDESGI LSPFSFSRRA TGEKDVRFKV LFCGICHTDL SMAKNEWGLT TYPLVPGHEI VGVVTEVGAK VKKFNAGDKV GVGYMAGSCR
101: SCDSCNDGDE NYCPKMILTS GAKNFDDTMT HGGYSDHMVC AEDFIIRIPD NLPLDGAAPL LCAGVTVYSP MKYHGLDKPG MHIGVVGLGG LGHVAVKFAK
201: AMGTKVTVIS TSERKRDEAV TRLGADAFLV SRDPKQMKDA MGTMDGIIDT VSATHPLLPL LGLLKNKGKL VMVGAPAEPL ELPVFPLIFG RKMVVGSMVG
301: GIKETQEMVD LAGKHNITAD IELISADYVN TAMERLAKAD VKYRFVIDVA NTMKPTP

Arabidopsis Description

CAD7ELI3-1 [Source:UniProtKB/TrEMBL;Acc:A0A178V3X8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.