Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G035410.1 | Barley | cytosol | 31.34 | 33.87 |
| Zm00001d020402_P001 | Maize | plastid | 49.25 | 27.05 |
| TraesCS7D01G184600.1 | Wheat | cytosol | 56.72 | 18.81 |
| CDX90392 | Canola | cytosol | 97.01 | 18.21 |
| Zm00001d020401_P001 | Maize | cytosol | 52.24 | 15.15 |
| CDX69348 | Canola | cytosol | 79.1 | 14.85 |
| CDX75688 | Canola | cytosol | 79.1 | 14.85 |
| CDY52519 | Canola | cytosol | 74.63 | 14.16 |
| CDX90391 | Canola | cytosol | 73.13 | 13.88 |
| CDY72501 | Canola | cytosol | 35.82 | 12.83 |
| Os08t0270400-00 | Rice | cytosol | 52.24 | 11.51 |
| CDY56752 | Canola | cytosol | 58.21 | 10.83 |
| TraesCS5B01G202700.1 | Wheat | cytosol | 56.72 | 10.67 |
| TraesCS7A01G183000.1 | Wheat | cytosol | 56.72 | 10.64 |
| CDY13791 | Canola | cytosol | 56.72 | 10.61 |
| CDX72704 | Canola | cytosol | 56.72 | 10.56 |
| CDX75687 | Canola | cytosol | 56.72 | 10.5 |
| CDX69347 | Canola | cytosol | 56.72 | 10.5 |
| TraesCS5A01G205700.1 | Wheat | cytosol | 55.22 | 10.39 |
| TraesCS5D01G210600.1 | Wheat | cytosol | 55.22 | 10.39 |
| TraesCS7D01G184500.1 | Wheat | cytosol | 55.22 | 10.36 |
| CDX76968 | Canola | cytosol | 55.22 | 10.34 |
| Zm00001d020400_P001 | Maize | plastid | 55.22 | 10.14 |
| Os10t0430200-01 | Rice | cytosol | 55.22 | 10.11 |
| Os09t0399800-01 | Rice | cytosol | 53.73 | 10.03 |
| TraesCS5A01G213900.1 | Wheat | plastid | 58.21 | 10.03 |
| Os09t0400400-01 | Rice | cytosol | 53.73 | 9.94 |
| EER98869 | Sorghum | cytosol | 53.73 | 9.94 |
| TraesCS5B01G209800.2 | Wheat | plastid | 56.72 | 9.77 |
| TraesCS5D01G218100.2 | Wheat | plastid | 55.22 | 9.54 |
| EER96708 | Sorghum | cytosol | 50.75 | 9.44 |
| TraesCS2D01G422400.1 | Wheat | cytosol | 49.25 | 8.97 |
| TraesCS6D01G353400.1 | Wheat | cytosol | 49.25 | 8.97 |
| TraesCS2A01G424600.1 | Wheat | cytosol | 49.25 | 8.94 |
| TraesCS2B01G444200.2 | Wheat | cytosol | 49.25 | 8.94 |
| OQU80077 | Sorghum | cytosol | 49.25 | 8.85 |
| TraesCS5A01G205600.1 | Wheat | plastid | 55.22 | 8.77 |
| TraesCS6B01G406300.1 | Wheat | cytosol | 47.76 | 8.77 |
| TraesCS6D01G353300.1 | Wheat | cytosol | 47.76 | 8.77 |
| CDY46173 | Canola | cytosol | 47.76 | 8.77 |
| TraesCS6D01G353700.1 | Wheat | cytosol | 47.76 | 8.74 |
| CDX99222 | Canola | cytosol | 47.76 | 8.74 |
| TraesCS6B01G406000.1 | Wheat | cytosol | 47.76 | 8.74 |
| Os04t0612700-01 | Rice | cytosol | 49.25 | 8.71 |
| Zm00001d002346_P002 | Maize | plastid | 47.76 | 8.65 |
| TraesCS5B01G202800.1 | Wheat | plastid | 53.73 | 8.55 |
| TraesCS5D01G210700.1 | Wheat | plastid | 53.73 | 8.55 |
| TraesCS6A01G369800.1 | Wheat | cytosol, golgi | 46.27 | 8.49 |
| TraesCS6B01G406200.1 | Wheat | cytosol | 46.27 | 8.47 |
| OQU82308 | Sorghum | cytosol | 47.76 | 8.42 |
| Zm00001d024314_P001 | Maize | cytosol | 44.78 | 8.36 |
| TraesCS7A01G350500.1 | Wheat | cytosol | 46.27 | 8.36 |
| TraesCS7B01G232400.1 | Wheat | cytosol, plastid | 46.27 | 8.22 |
| TraesCS7A01G380100.1 | Wheat | cytosol | 44.78 | 8.15 |
| TraesCS7D01G376600.1 | Wheat | cytosol | 44.78 | 8.15 |
| OQU89465 | Sorghum | plastid | 50.75 | 8.13 |
| CDX72466 | Canola | cytosol | 43.28 | 8.12 |
| CDX75413 | Canola | cytosol | 43.28 | 8.12 |
| CDY49288 | Canola | cytosol | 43.28 | 8.12 |
| Os03t0223200-00 | Rice | cytosol | 46.27 | 8.12 |
| TraesCS7B01G282100.1 | Wheat | cytosol | 44.78 | 8.11 |
| Os09t0400000-00 | Rice | plasma membrane | 52.24 | 8.03 |
| CDX69037 | Canola | cytosol | 41.79 | 7.84 |
| TraesCS7D01G328300.1 | Wheat | cytosol | 46.27 | 7.56 |
| TraesCS6A01G370100.1 | Wheat | cytosol | 38.81 | 7.3 |
| CDX72936 | Canola | cytosol | 35.82 | 6.84 |
| Os09t0400300-01 | Rice | plasma membrane | 34.33 | 6.61 |
| Solyc05g024320.1.1 | Tomato | cytosol | 4.48 | 1.42 |
| CDY52520 | Canola | cytosol | 0.0 | 0.0 |
| VIT_18s0001g01160.t01 | Wine grape | mitochondrion | 0.0 | 0.0 |
| PGSC0003DMT400043759 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY63551 | EnsemblPlantsGene:GSBRNA2T00039406001 | Gene3D:3.90.180.10 | GO:A0A078J8Z1 | InterPro:GroES-like_sf | PANTHER:PTHR42683 |
| PANTHER:PTHR42683:SF27 | ProteinID:CDY63551 | ProteinID:CDY63551.1 | SUPFAM:SSF50129 | UniParc:UPI0004EC784F | UniProt:A0A078J8Z1 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC03g76560DBnaC03g76560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8Z1]
Coordinates
chrLK034318:+:32734..33219
Molecular Weight (calculated)
7482.0 Da
IEP (calculated)
5.625
GRAVY (calculated)
-0.079
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MGEVLKKEAY GLAVKDESGV ISPFHFSRRE TGENDVRFKV LFCGICHTDL SMAINEWGFT SYPLVPG
001: MGKVLEKEAF GLAAKDESGI LSPFSFSRRA TGEKDVRFKV LFCGICHTDL SMAKNEWGLT TYPLVPGHEI VGVVTEVGAK VKKFNAGDKV GVGYMAGSCR
101: SCDSCNDGDE NYCPKMILTS GAKNFDDTMT HGGYSDHMVC AEDFIIRIPD NLPLDGAAPL LCAGVTVYSP MKYHGLDKPG MHIGVVGLGG LGHVAVKFAK
201: AMGTKVTVIS TSERKRDEAV TRLGADAFLV SRDPKQMKDA MGTMDGIIDT VSATHPLLPL LGLLKNKGKL VMVGAPAEPL ELPVFPLIFG MNLFVSHL
101: SCDSCNDGDE NYCPKMILTS GAKNFDDTMT HGGYSDHMVC AEDFIIRIPD NLPLDGAAPL LCAGVTVYSP MKYHGLDKPG MHIGVVGLGG LGHVAVKFAK
201: AMGTKVTVIS TSERKRDEAV TRLGADAFLV SRDPKQMKDA MGTMDGIIDT VSATHPLLPL LGLLKNKGKL VMVGAPAEPL ELPVFPLIFG MNLFVSHL
Arabidopsis Description
CAD7ELI3-1 [Source:UniProtKB/TrEMBL;Acc:A0A178V3X8]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.