CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031216.1-P	Field mustard	cytosol	97.49	97.49
CDY13791	Canola	cytosol	97.21	97.21
AT2G21730.1	Thale cress	peroxisome	89.94	85.64
AT2G21890.1	Thale cress	cytosol	89.11	85.07
CDY56752	Canola	cytosol	83.24	82.78
CDX72704	Canola	cytosol	82.96	82.5
VIT_04s0044g00210.t01	Wine grape	cytosol	73.46	73.26
PGSC0003DMT400047475	Potato	cytosol	73.46	73.06
KRH59514	Soybean	cytosol	73.46	73.06
KRH43378	Soybean	cytosol	72.07	72.47
Solyc03g078430.1.1	Tomato	extracellular, plastid, vacuole	39.66	68.27
Solyc03g078440.2.1	Tomato	cytosol	73.46	67.26
CDX90391	Canola	cytosol	62.01	62.89
CDY52519	Canola	cytosol	62.01	62.89
EER98870	Sorghum	cytosol	16.48	60.2
CDX75688	Canola	cytosol	58.66	58.82
CDX69348	Canola	cytosol	57.82	57.98
CDX90392	Canola	cytosol	57.26	57.42
CDY52520	Canola	cytosol	42.18	57.41
CDX75687	Canola	cytosol	57.82	57.18
CDX69347	Canola	cytosol	57.82	57.18
CDY63551	Canola	cytosol	10.34	55.22
CDY46173	Canola	cytosol	48.32	47.4
CDX72466	Canola	cytosol	47.21	47.34
CDX72936	Canola	cytosol	46.37	47.29
CDY49288	Canola	cytosol	46.93	47.06
CDX99222	Canola	cytosol	48.04	46.99
CDX69037	Canola	cytosol	46.09	46.22
CDX75413	Canola	cytosol	46.09	46.22
CDY72501	Canola	cytosol	23.46	44.92

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	GO:A0A078CPG5	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	EnsemblPlants:CDX76968	ProteinID:CDX76968	ProteinID:CDX76968.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00127513001	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF12	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI0004EEC42E	SEG:seg	:	:	:	:

Description

BnaC08g35540D

Coordinates

chrLK031808:-:2326263..2328344

Molecular Weight (calculated)

38804.6 Da

IEP (calculated)

6.779

GRAVY (calculated)

-0.115

Length

358 amino acids

Sequence
(BLAST)

001: MAKSSDQNKA FGWAANDKSG VLSPFHFSRR ENGDDDVTVK ILFCGVCHSD LHTIKNDWGF SHYPIIPGHE IVGIATKVGK NVTKFKEGDR VGVGVIIGSC
101: QSCESCNQDL ENYCPQLVYT YNSRSSDGTR NQGGYSDKIV VDQRFVLSFP DGLPSDSGAP LLCAGITVYS PMKYYGMTDE KGKHLGVSGL GGLGHIAVKI
201: GKAFGLKVTV ISRSSDKESE AIDRLGADSF LVTTDSQKMK DSFGTMDFVL DTVSAEHSLL PLFSLLKVNG KLVALGLPEK PLELPIFPLV LGRKMVGGSQ
301: IGGMKETQEM LDFCAKHNIV ADIELIKMSD INSAMDRLAK SDVRYRFVID VANSINSA

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.