Factsheet for Solyc03g078440.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047475	Potato	cytosol	86.7	94.17
Solyc03g078430.1.1	Tomato	extracellular, plastid, vacuole	42.46	79.81
VIT_04s0044g00190.t01	Wine grape	cytosol	72.38	78.83
Bra033613.1-P	Field mustard	cytosol	71.61	77.78
CDY56752	Canola	cytosol	71.61	77.78
CDX72704	Canola	cytosol	71.36	77.5
AT4G39330.1	Thale cress	cytosol	70.08	76.11
KRH43378	Soybean	cytosol	68.8	75.56
VIT_04s0044g00210.t01	Wine grape	cytosol	69.31	75.49
KRH59514	Soybean	cytosol	68.54	74.44
Bra031216.1-P	Field mustard	cytosol	67.77	74.02
CDX76968	Canola	cytosol	67.26	73.46
CDY13791	Canola	cytosol	66.75	72.91
AT2G21730.1	Thale cress	peroxisome	66.24	68.88
AT2G21890.1	Thale cress	cytosol	65.73	68.53
Solyc11g011340.1.1	Tomato	cytosol	59.59	64.9
Solyc11g010980.1.1	Tomato	cytosol	59.08	64.35
Solyc11g010990.1.1	Tomato	cytosol	59.08	64.35
Solyc11g011330.1.1	Tomato	cytosol	56.78	62.36
Solyc11g010960.1.1	Tomato	cytosol	56.78	61.84
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	24.04	58.02
EER98870	Sorghum	cytosol	14.07	56.12
Solyc02g069250.2.1	Tomato	peroxisome	49.62	53.89
Solyc02g030480.2.1	Tomato	peroxisome	49.36	53.61
Solyc01g107590.2.1	Tomato	cytosol, extracellular	47.83	52.38
Solyc08g014360.1.1	Tomato	plastid	48.34	49.74
Solyc08g048300.1.1	Tomato	cytosol	11.0	46.74
Solyc05g024320.1.1	Tomato	cytosol	24.04	44.34
Solyc12g055820.1.1	Tomato	cytosol	47.83	35.48

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:K4BHS3	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF12
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc03g078440.2	EnsemblPlants:Solyc03g078440.2.1	UniParc:UPI0002767FAF
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:50934278..50937138

Molecular Weight (calculated)

42799.1 Da

IEP (calculated)

8.377

GRAVY (calculated)

-0.028

Length

391 amino acids

Sequence
(BLAST)

001: MKKKFSAGEF RELRIDFKKY KFLLPKQRFR EMVKGAVNEQ PQKAFGWAAR DPSGVLSPFH FSRRENGNDD ATVKIHYCGV CHSDLHTLKN EWGFTKYPIL
101: PGHEIVGIVT AVGSSVHKFK VGDRVGVGVI VGSCQTCDIC EQSLENYCPK AIFTYNSTDH DGTNTYGGYS DIIVVHQRFV LRFPENLPSD AGAPLLCAGI
201: TVYSPMKYYG MTEPGKHLGI AGLGGLGHIA VKIGKAFGLK VTVISTSPKK EDEAITKLGA DAFVLSTDPA KFKAAVNTMD YIIDTIAAVH PLAPLLSLLK
301: MDGKLITIGL PEKPLELPIF PLVLGRKLVG GSDIGGMKET QEMLDFCAKH NITADIELIS VDNINMAMER LAKSDVKYRF VIDIANSLSL S

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.