Factsheet for VIT_04s0044g00190.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43378	Soybean	cytosol	78.55	79.21
KRH59514	Soybean	cytosol	79.39	79.17
PGSC0003DMT400047475	Potato	cytosol	78.27	78.06
VIT_04s0044g00210.t01	Wine grape	cytosol	77.72	77.72
Solyc03g078440.2.1	Tomato	cytosol	78.83	72.38
VIT_00s0371g00100.t01	Wine grape	cytosol	70.47	69.89
VIT_00s0346g00080.t01	Wine grape	cytosol	70.47	69.89
Solyc03g078430.1.1	Tomato	extracellular, plastid, vacuole	40.11	69.23
VIT_00s0371g00010.t01	Wine grape	cytosol	13.37	68.57
VIT_00s1389g00010.t01	Wine grape	cytosol	68.52	68.33
VIT_00s0615g00010.t01	Wine grape	cytosol	68.52	68.33
VIT_00s0371g00050.t01	Wine grape	cytosol	68.25	68.06
VIT_00s0346g00110.t01	Wine grape	cytosol	67.97	67.78
VIT_00s0371g00020.t01	Wine grape	cytosol	10.31	67.27
VIT_00s0615g00020.t01	Wine grape	cytosol	67.41	67.22
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	68.25	65.16
VIT_00s0346g00100.t01	Wine grape	cytosol	63.79	63.43
VIT_00s0371g00060.t01	Wine grape	cytosol	52.65	63.0
VIT_00s0346g00120.t01	Wine grape	cytosol	63.23	62.88
VIT_00s0218g00010.t01	Wine grape	cytosol	63.79	62.4
VIT_00s0615g00030.t01	Wine grape	cytosol	68.52	61.81
VIT_00s0371g00040.t01	Wine grape	cytosol	38.16	60.89
VIT_10s0003g04910.t01	Wine grape	cytosol	61.56	60.88
VIT_18s0001g14910.t01	Wine grape	cytosol	59.61	59.44
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	54.04	57.4
EER98870	Sorghum	cytosol	15.6	57.14
VIT_00s0174g00270.t01	Wine grape	cytosol	53.48	53.78
VIT_02s0025g03100.t01	Wine grape	cytosol	52.92	53.52
VIT_00s0174g00220.t01	Wine grape	golgi	27.02	53.01
VIT_00s0371g00070.t01	Wine grape	cytosol	52.65	51.78
VIT_03s0180g00260.t01	Wine grape	cytosol	51.25	51.54
VIT_03s0180g00250.t01	Wine grape	cytosol	49.86	50.14
VIT_07s0129g01030.t01	Wine grape	cytosol, mitochondrion	48.75	49.72
VIT_02s0025g03110.t01	Wine grape	cytosol	10.59	49.35
VIT_00s0174g00210.t01	Wine grape	cytosol	17.55	47.37
VIT_18s0001g01160.t01	Wine grape	mitochondrion	20.61	45.96
VIT_00s0174g00280.t01	Wine grape	extracellular	43.18	43.18

Protein Annotations

EntrezGene:100245522	wikigene:100245522	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EMBL:AM486616	ProteinID:CAN77732	ProteinID:CAN77732.1	ProteinID:CBI37637
ProteinID:CBI37637.3	UniProt:D7U461	EMBL:FN596506	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:GroES-like_sf	EntrezGene:LOC100245522	wikigene:LOC100245522	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF12	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	TIGR:TC53733	UniParc:UPI00015CDFE7	ArrayExpress:VIT_04s0044g00190	EnsemblPlantsGene:VIT_04s0044g00190	EnsemblPlants:VIT_04s0044g00190.t01
unigene:Vvi.5214	RefSeq:XP_002279832	RefSeq:XP_002279832.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:-:20891405..20894167

Molecular Weight (calculated)

39074.5 Da

IEP (calculated)

6.774

GRAVY (calculated)

-0.044

Length

359 amino acids

Sequence
(BLAST)

001: MVKSPEEEHP QKAFGWAARD PSGTLSPFHF SRRENGDEDV TVKILYCGVC HSDLHSVKNE WGITRYPIVP GHEIVGIVIQ LGNNVKKFKM GDRVGVGVLV
101: GSCKTCETCQ QDLENYCPSM IFTYNSTSQD GTRTYGGYSD IVVVDQRYVL RIPDNMPLDA GAPLLCAGIT VYSPMKYYGM TEPGKHLGVA GLGGLGHVAV
201: KLGKAFGLKV TVISTSPNKE DEAINKLGAD CFLVSTNPEK VQAALGTMDY IIDTVSAIHS LGPLLAMLKL NGKLITVGLP DKPLELPIFP LVMGRKLIGG
301: SDIGGIKETQ EMLDFCAKHN ITADIELIQM DYINTAMKRL SKSDVKYRFV IDVANSLSQ

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.