Factsheet for VIT_07s0129g01030.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0180g00260.t01	Wine grape	cytosol	67.05	66.11
VIT_03s0180g00250.t01	Wine grape	cytosol	66.19	65.27
VIT_00s0346g00080.t01	Wine grape	cytosol	52.84	51.38
VIT_00s0371g00100.t01	Wine grape	cytosol	52.84	51.38
VIT_04s0044g00210.t01	Wine grape	cytosol	50.28	49.3
VIT_00s0615g00020.t01	Wine grape	cytosol	50.28	49.17
VIT_00s0371g00050.t01	Wine grape	cytosol	50.0	48.89
VIT_04s0044g00190.t01	Wine grape	cytosol	49.72	48.75
VIT_00s0346g00110.t01	Wine grape	cytosol	49.72	48.61
VIT_00s1389g00010.t01	Wine grape	cytosol	48.86	47.78
VIT_00s0615g00010.t01	Wine grape	cytosol	48.86	47.78
VIT_18s0001g14910.t01	Wine grape	cytosol	48.58	47.5
VIT_00s0371g00060.t01	Wine grape	cytosol	40.34	47.33
VIT_00s0346g00100.t01	Wine grape	cytosol	48.3	47.09
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	50.28	47.07
VIT_00s0346g00120.t01	Wine grape	cytosol	48.01	46.81
VIT_00s0218g00010.t01	Wine grape	cytosol	47.73	45.78
VIT_00s0371g00010.t01	Wine grape	cytosol	9.09	45.71
VIT_00s0174g00270.t01	Wine grape	cytosol	46.31	45.66
VIT_10s0003g04910.t01	Wine grape	cytosol	46.59	45.18
VIT_00s0174g00220.t01	Wine grape	golgi	23.3	44.81
VIT_00s0371g00040.t01	Wine grape	cytosol	28.12	44.0
VIT_00s0615g00030.t01	Wine grape	cytosol	49.72	43.97
VIT_02s0025g03100.t01	Wine grape	cytosol	43.47	43.1
VIT_18s0001g01160.t01	Wine grape	mitochondrion	19.6	42.86
VIT_00s0174g00210.t01	Wine grape	cytosol	16.19	42.86
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	39.77	41.42
VIT_00s0371g00020.t01	Wine grape	cytosol	5.97	38.18
VIT_00s0371g00070.t01	Wine grape	cytosol	38.35	36.99
VIT_00s0174g00280.t01	Wine grape	extracellular	36.93	36.21
VIT_02s0025g03110.t01	Wine grape	cytosol	7.39	33.77

Protein Annotations

EntrezGene:100247381	wikigene:100247381	MapMan:21.6.1.8	Gene3D:3.40.50.720	Gene3D:3.90.180.10	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	ProteinID:CBI33767	ProteinID:CBI33767.3	UniProt:D7TTE5	EMBL:FN596246
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100247381	wikigene:LOC100247381
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683
PANTHER:PTHR42683:SF1	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI00015CA29A	ArrayExpress:VIT_07s0129g01030
EnsemblPlantsGene:VIT_07s0129g01030	EnsemblPlants:VIT_07s0129g01030.t01	unigene:Vvi.20153	RefSeq:XP_002283356	RefSeq:XP_002283356.1	SEG:seg

Description

No Description!

Coordinates

chr7:-:16177192..16178852

Molecular Weight (calculated)

38555.7 Da

IEP (calculated)

6.668

GRAVY (calculated)

-0.052

Length

352 amino acids

Sequence
(BLAST)

001: MEGRRVVGWA ARDASGLLSP YSFTLRKTGP EDVVIKVLYC GMDHTDLHQM RNEVHSTNYP LVPGHEVVGE VVELGSEVKK YRVGDMVGVG CMVGSCGRCL
101: SCNSNIEQYC NNRIFTYNGI YKDGRPTQGG FCSAMIVHQK FVVRIPEKLS PEQAAPLLCA GVTAYSPLRQ FMGSGKVLNA GILGLGGVGH LGVKIAKAMG
201: HHVTVISSSD KKREEALQHL GADAFLVSSN AAEMEEAANN LDYILDTVPA LHPLQSYLSL LKVDGKLFLV GVSPKPLQFD ATDLILGKKN ITGSFIGSME
301: ETQEILDFWA EKNLTSMIEI VKMDYVNKAF ERMERSDVRY RFVVDVAGSN LE

Best Arabidopsis Sequence Match ( AT3G19450.1 )
(BLAST)

001: MGSVEAGEKK ALGWAARDPS GVLSPYSYTL RSTGADDVYI KVICCGICHT DIHQIKNDLG MSNYPMVPGH EVVGEVLEVG SDVSKFTVGD VVGVGVVVGC
101: CGSCKPCSSE LEQYCNKRIW SYNDVYTDGK PTQGGFADTM IVNQKFVVKI PEGMAVEQAA PLLCAGVTVY SPLSHFGLMA SGLKGGILGL GGVGHMGVKI
201: AKAMGHHVTV ISSSDKKKEE AIEHLGADDY VVSSDPAEMQ RLADSLDYII DTVPVFHPLD PYLACLKLDG KLILMGVINT PLQFVTPLVI LGRKVISGSF
301: IGSIKETEEV LAFCKEKGLT STIETVKIDE LNIAFERLRK NDVRYRFVVD VAGSNLVEEA ATTTN

Arabidopsis Description

CAD4Cinnamyl alcohol dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:P48523]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.