Factsheet for VIT_00s0174g00280.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0174g00210.t01	Wine grape	cytosol	26.46	71.43
VIT_02s0025g03100.t01	Wine grape	cytosol	68.25	69.01
VIT_00s0174g00270.t01	Wine grape	cytosol	63.51	63.87
HORVU3Hr1G097060.1	Barley	cytosol, plastid	27.02	63.4
GSMUA_Achr1P00850_001	Banana	cytosol	61.56	61.9
EER88001	Sorghum	cytosol	60.45	61.3
Zm00001d045043_P001	Maize	cytosol	60.45	61.3
GSMUA_Achr4P26450_001	Banana	cytosol	60.45	60.61
OQU75993	Sorghum	cytosol	59.61	60.45
TraesCS3B01G485000.1	Wheat	cytosol	59.61	60.45
Os11t0622800-00	Rice	cytosol	59.61	60.45
Os10t0194200-01	Rice	plasma membrane, plastid	59.33	60.17
TraesCS3A01G448400.1	Wheat	cytosol	59.33	60.17
TraesCS3B01G484500.1	Wheat	cytosol	59.05	59.89
EER88002	Sorghum	cytosol	58.77	59.6
TraesCS3A01G448800.1	Wheat	cytosol	59.05	59.55
HORVU3Hr1G097140.1	Barley	cytosol	58.77	59.27
HORVU3Hr1G097160.1	Barley	cytosol	58.22	59.04
TraesCS3D01G440900.1	Wheat	cytosol	59.33	58.52
OQU79199	Sorghum	cytosol	51.53	57.45
VIT_00s0174g00220.t01	Wine grape	golgi	28.13	55.19
KXG19525	Sorghum	cytosol	59.61	51.2
TraesCS3D01G441200.1	Wheat	extracellular, golgi	59.61	50.23
VIT_00s0371g00060.t01	Wine grape	cytosol	39.55	47.33
VIT_00s0615g00010.t01	Wine grape	cytosol	44.01	43.89
VIT_00s1389g00010.t01	Wine grape	cytosol	43.73	43.61
VIT_00s0346g00110.t01	Wine grape	cytosol	43.45	43.33
VIT_00s0615g00020.t01	Wine grape	cytosol	43.45	43.33
VIT_18s0001g14910.t01	Wine grape	cytosol	43.45	43.33
VIT_00s0371g00050.t01	Wine grape	cytosol	43.45	43.33
VIT_04s0044g00190.t01	Wine grape	cytosol	43.18	43.18
VIT_00s0371g00010.t01	Wine grape	cytosol	8.36	42.86
VIT_00s0346g00080.t01	Wine grape	cytosol	42.62	42.27
VIT_00s0218g00010.t01	Wine grape	cytosol	43.18	42.23
VIT_00s0346g00100.t01	Wine grape	cytosol	42.06	41.83
VIT_00s0371g00100.t01	Wine grape	cytosol	42.06	41.71
VIT_00s0346g00120.t01	Wine grape	cytosol	41.78	41.55
VIT_04s0044g00210.t01	Wine grape	cytosol	41.5	41.5
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	43.45	41.49
OQU75994	Sorghum	cytosol	20.33	40.78
VIT_02s0025g03110.t01	Wine grape	cytosol	8.64	40.26
VIT_10s0003g04910.t01	Wine grape	cytosol	40.39	39.94
VIT_00s0615g00030.t01	Wine grape	cytosol	43.45	39.2
VIT_03s0180g00260.t01	Wine grape	cytosol	38.44	38.66
VIT_00s0371g00020.t01	Wine grape	cytosol	5.85	38.18
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	35.65	37.87
VIT_00s0371g00040.t01	Wine grape	cytosol	23.4	37.33
VIT_03s0180g00250.t01	Wine grape	cytosol	37.05	37.25
VIT_07s0129g01030.t01	Wine grape	cytosol, mitochondrion	36.21	36.93
VIT_00s0371g00070.t01	Wine grape	cytosol	34.26	33.7
VIT_18s0001g01160.t01	Wine grape	mitochondrion	11.7	26.09
Zm00001d002250_P001	Maize	plastid	58.22	6.67

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	ProteinID:CBI38295
ProteinID:CBI38295.3	InterPro:D-isomer_DH_CS1	UniProt:D7U6C6	EMBL:FN596519	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00065
PANTHER:PTHR42683	PANTHER:PTHR42683:SF17	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001BE5067	ArrayExpress:VIT_00s0174g00280
EnsemblPlantsGene:VIT_00s0174g00280	EnsemblPlants:VIT_00s0174g00280.t01	RefSeq:XP_003634983	RefSeq:XP_003634983.1	SEG:seg	:

Description

No Description!

Coordinates

chrUn:+:7153743..7156313

Molecular Weight (calculated)

38791.2 Da

IEP (calculated)

7.979

GRAVY (calculated)

0.107

Length

359 amino acids

Sequence
(BLAST)

001: MIIKSIIYKM ILFLLSRFDP FVISYSFQHK INHMMENCLG WAARDPSGVL SPYSFNRRVV GSDDVSLKIT HCGICYADII HTRNKFGNSK YPVVPGHDIV
101: GIVKEVGSNV GVFKVGDSVG VGTYVNSCRE CENCEEGLEI HCSKGPVFTF GGVDVDGTIT KGGYSSFIVV HQRYCYRIAD DYPLGLAAPL LCAGITVYTP
201: MIRHKMNQPG KSLGVIGLGG LGHMAVKFGK AFRLNVTVFS TSMSKKEEAL TLLGADKFVL SSDEQDMKAM AKSLDFIINT ASGDHPFDPY MSLLKTAGIL
301: VLVGFPSPEI KLSTISLLTG MRTVCGSVTG GTKDTRNAGF LCCPQDISRG GNGGNSECE

Best Arabidopsis Sequence Match ( AT1G72680.1 )
(BLAST)

001: MSSSESVENE CMCWAARDPS GLLSPHTITR RSVTTDDVSL TITHCGVCYA DVIWSRNQHG DSKYPLVPGH EIAGIVTKVG PNVQRFKVGD HVGVGTYVNS
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK

Arabidopsis Description

CAD1CAD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.