Factsheet for VIT_00s0174g00220.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g03110.t01	Wine grape	cytosol	28.96	68.83
VIT_02s0025g03100.t01	Wine grape	cytosol	80.33	41.41
VIT_00s0371g00040.t01	Wine grape	cytosol	49.73	40.44
VIT_00s0174g00270.t01	Wine grape	cytosol	75.41	38.66
VIT_18s0001g01160.t01	Wine grape	mitochondrion	33.88	38.51
VIT_00s0371g00020.t01	Wine grape	cytosol	10.38	34.55
VIT_18s0001g14910.t01	Wine grape	cytosol	55.74	28.33
VIT_00s0174g00280.t01	Wine grape	extracellular	55.19	28.13
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	50.82	27.51
VIT_00s0615g00020.t01	Wine grape	cytosol	53.55	27.22
VIT_04s0044g00190.t01	Wine grape	cytosol	53.01	27.02
VIT_00s0615g00010.t01	Wine grape	cytosol	53.01	26.94
VIT_00s1389g00010.t01	Wine grape	cytosol	52.46	26.67
VIT_00s0371g00070.t01	Wine grape	cytosol	53.01	26.58
VIT_00s0346g00080.t01	Wine grape	cytosol	52.46	26.52
VIT_00s0371g00100.t01	Wine grape	cytosol	51.91	26.24
VIT_00s0346g00110.t01	Wine grape	cytosol	51.37	26.11
VIT_10s0003g04910.t01	Wine grape	cytosol	51.37	25.9
VIT_00s0371g00050.t01	Wine grape	cytosol	50.82	25.83
VIT_00s0346g00100.t01	Wine grape	cytosol	50.82	25.76
VIT_00s0346g00120.t01	Wine grape	cytosol	50.27	25.48
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	51.91	25.27
VIT_04s0044g00210.t01	Wine grape	cytosol	48.09	24.51
VIT_00s0615g00030.t01	Wine grape	cytosol	51.91	23.87
VIT_03s0180g00260.t01	Wine grape	cytosol	45.9	23.53
VIT_07s0129g01030.t01	Wine grape	cytosol, mitochondrion	44.81	23.3
VIT_00s0218g00010.t01	Wine grape	cytosol	46.45	23.16
VIT_03s0180g00250.t01	Wine grape	cytosol	44.81	22.97
VIT_00s0371g00060.t01	Wine grape	cytosol	32.24	19.67
VIT_00s0174g00210.t01	Wine grape	cytosol	1.09	1.5
VIT_00s0371g00010.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:ADH_C	ProteinID:CCB60944	ProteinID:CCB60944.1	InterPro:D-isomer_DH_CS1
UniProt:F6I1X7	EMBL:FN596519	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	ScanProsite:PS00065	PANTHER:PTHR42683	PANTHER:PTHR42683:SF17	SUPFAM:SSF51735	UniParc:UPI0002109761
ArrayExpress:VIT_00s0174g00220	EnsemblPlantsGene:VIT_00s0174g00220	EnsemblPlants:VIT_00s0174g00220.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chrUn:+:7091682..7092994

Molecular Weight (calculated)

19825.4 Da

IEP (calculated)

8.236

GRAVY (calculated)

0.178

Length

183 amino acids

Sequence
(BLAST)

001: MVRHKMNQPG KSLGVVGLGG LGHLAVKFGK AFGLNVIVFS TSISKKEEAL NLLGADKFIV SSDEQEMTGM VKSLDFIIGT VSPNHSFDLY LSLLKTAGTF
101: VLVGCPNEVK LNPLSILVGM KTISGSATGG MKETQEMLDF CAAHKIHPNI EVVPIQYANE ALERLIKSDV KYRFVVDIEN SLK

Best Arabidopsis Sequence Match ( AT1G72680.1 )
(BLAST)

001: MSSSESVENE CMCWAARDPS GLLSPHTITR RSVTTDDVSL TITHCGVCYA DVIWSRNQHG DSKYPLVPGH EIAGIVTKVG PNVQRFKVGD HVGVGTYVNS
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK

Arabidopsis Description

CAD1CAD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.