Factsheet for VIT_00s0174g00270.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0174g00220.t01	Wine grape	golgi	38.66	75.41
VIT_00s0174g00210.t01	Wine grape	cytosol	27.45	73.68
VIT_02s0025g03100.t01	Wine grape	cytosol	72.83	73.24
OQU75993	Sorghum	cytosol	66.67	67.23
GSMUA_Achr4P26450_001	Banana	cytosol	67.23	67.04
Zm00001d045043_P001	Maize	cytosol	66.39	66.95
GSMUA_Achr1P00850_001	Banana	cytosol	66.67	66.67
TraesCS3B01G485000.1	Wheat	cytosol	65.83	66.38
EER88002	Sorghum	cytosol	65.55	66.1
EER88001	Sorghum	cytosol	65.27	65.82
Os10t0194200-01	Rice	plasma membrane, plastid	64.99	65.54
TraesCS3B01G484500.1	Wheat	cytosol	64.71	65.25
VIT_02s0025g03110.t01	Wine grape	cytosol	14.01	64.94
TraesCS3A01G448400.1	Wheat	cytosol	64.15	64.69
TraesCS3A01G448800.1	Wheat	cytosol	64.43	64.61
HORVU3Hr1G097140.1	Barley	cytosol	64.15	64.33
Os11t0622800-00	Rice	cytosol	63.31	63.84
HORVU3Hr1G097160.1	Barley	cytosol	63.31	63.84
VIT_00s0174g00280.t01	Wine grape	extracellular	63.87	63.51
TraesCS3D01G440900.1	Wheat	cytosol	63.87	62.64
OQU79199	Sorghum	cytosol	54.62	60.56
HORVU3Hr1G097060.1	Barley	cytosol, plastid	25.21	58.82
KXG19525	Sorghum	cytosol	65.27	55.74
TraesCS3D01G441200.1	Wheat	extracellular, golgi	64.71	54.23
VIT_04s0044g00190.t01	Wine grape	cytosol	53.78	53.48
VIT_00s0346g00080.t01	Wine grape	cytosol	53.78	53.04
VIT_00s0371g00100.t01	Wine grape	cytosol	52.94	52.21
VIT_00s0615g00010.t01	Wine grape	cytosol	52.1	51.67
VIT_00s0346g00110.t01	Wine grape	cytosol	51.82	51.39
VIT_00s1389g00010.t01	Wine grape	cytosol	51.82	51.39
VIT_00s0371g00050.t01	Wine grape	cytosol	51.82	51.39
VIT_00s0346g00100.t01	Wine grape	cytosol	51.82	51.25
VIT_00s0346g00120.t01	Wine grape	cytosol	51.54	50.97
VIT_00s0371g00040.t01	Wine grape	cytosol	31.93	50.67
VIT_00s0615g00020.t01	Wine grape	cytosol	50.98	50.56
VIT_18s0001g14910.t01	Wine grape	cytosol	50.42	50.0
VIT_00s0371g00060.t01	Wine grape	cytosol	41.18	49.0
VIT_04s0044g00210.t01	Wine grape	cytosol	49.02	48.75
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	50.98	48.4
VIT_10s0003g04910.t01	Wine grape	cytosol	48.46	47.66
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	43.98	46.45
VIT_07s0129g01030.t01	Wine grape	cytosol, mitochondrion	45.66	46.31
VIT_03s0180g00260.t01	Wine grape	cytosol	46.22	46.22
VIT_00s0218g00010.t01	Wine grape	cytosol	47.34	46.05
VIT_00s0615g00030.t01	Wine grape	cytosol	50.98	45.73
VIT_00s0371g00010.t01	Wine grape	cytosol	8.96	45.71
VIT_03s0180g00250.t01	Wine grape	cytosol	45.1	45.1
VIT_00s0371g00070.t01	Wine grape	cytosol	42.86	41.92
OQU75994	Sorghum	cytosol	20.73	41.34
VIT_18s0001g01160.t01	Wine grape	mitochondrion	17.37	38.51
VIT_00s0371g00020.t01	Wine grape	cytosol	5.88	38.18
Zm00001d002250_P001	Maize	plastid	64.71	7.37

Protein Annotations

EntrezGene:100244946	wikigene:100244946	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EMBL:AM483320	ProteinID:CAN81860	ProteinID:CAN81860.1	ProteinID:CBI38294
ProteinID:CBI38294.3	UniProt:D7U6C5	EMBL:FN596519	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:GroES-like_sf	EntrezGene:LOC100244946	wikigene:LOC100244946	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF17	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI0001986009	ArrayExpress:VIT_00s0174g00270	EnsemblPlantsGene:VIT_00s0174g00270	EnsemblPlants:VIT_00s0174g00270.t01	RefSeq:XP_002273147
RefSeq:XP_002273147.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:7152028..7153661

Molecular Weight (calculated)

38970.8 Da

IEP (calculated)

6.429

GRAVY (calculated)

-0.073

Length

357 amino acids

Sequence
(BLAST)

001: MSKPDMMNNN CLGWAARDES GVLSPYTFTR REVGDEDVSL KITHCGICYA DMLFTKNRLG DSRYPLVPGH EIVGIVKEVG SNVHHFKVGH RVGVGAYVNS
101: CRECESCNQS LEVYCSKGSV YTSNGVDADG TITNGGYSSF IVVHERYCFR IPDEYPLALA APLLCPGITA YSPMVRHKMN QPGKSLEVIG LGGVGHLAVK
201: FGKAFGLNVK LFSTSISKKE EALSLLGDDN FVVSSDEQQM KAMANSLDFI IDTASGDHSL DHYMSCLKTA GVLALVGFPG DQIKLSPASL LRGMKTISGS
301: LVGGVKETQE MLDFCAAHKI YPDIEIVPIQ YVNEAWERLT KGDVKYRFVI DVENSLK

Best Arabidopsis Sequence Match ( AT1G72680.1 )
(BLAST)

001: MSSSESVENE CMCWAARDPS GLLSPHTITR RSVTTDDVSL TITHCGVCYA DVIWSRNQHG DSKYPLVPGH EIAGIVTKVG PNVQRFKVGD HVGVGTYVNS
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK

Arabidopsis Description

CAD1CAD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.