Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P00850_001 | Banana | cytosol | 79.33 | 79.55 |
| VIT_02s0025g03100.t01 | Wine grape | cytosol | 74.02 | 74.65 |
| TraesCS3B01G485000.1 | Wheat | cytosol | 73.18 | 74.01 |
| TraesCS3A01G448800.1 | Wheat | cytosol | 72.07 | 72.47 |
| Zm00001d045043_P001 | Maize | cytosol | 71.51 | 72.32 |
| TraesCS3B01G484500.1 | Wheat | cytosol | 71.51 | 72.32 |
| TraesCS3A01G448400.1 | Wheat | cytosol | 71.51 | 72.32 |
| KRH10632 | Soybean | cytosol | 71.79 | 71.99 |
| HORVU3Hr1G097140.1 | Barley | cytosol | 71.51 | 71.91 |
| OQU75993 | Sorghum | cytosol | 70.67 | 71.47 |
| EER88001 | Sorghum | cytosol | 70.39 | 71.19 |
| Os10t0194200-01 | Rice | plasma membrane, plastid | 70.39 | 71.19 |
| HORVU3Hr1G097160.1 | Barley | cytosol | 70.39 | 71.19 |
| AT1G72680.1 | Thale cress | cytosol | 70.39 | 70.99 |
| KRH21722 | Soybean | cytosol | 70.67 | 70.87 |
| Bra016041.1-P | Field mustard | cytosol | 69.83 | 70.62 |
| EER88002 | Sorghum | cytosol | 69.27 | 70.06 |
| TraesCS3D01G440900.1 | Wheat | cytosol | 70.95 | 69.78 |
| CDX72936 | Canola | cytosol | 67.6 | 68.95 |
| Os11t0622800-00 | Rice | cytosol | 68.16 | 68.93 |
| OQU79199 | Sorghum | cytosol | 61.73 | 68.63 |
| VIT_02s0025g03110.t01 | Wine grape | cytosol | 14.53 | 67.53 |
| VIT_00s0174g00270.t01 | Wine grape | cytosol | 67.04 | 67.23 |
| HORVU3Hr1G097060.1 | Barley | cytosol, plastid | 27.93 | 65.36 |
| CDY72501 | Canola | cytosol | 34.08 | 65.24 |
| PGSC0003DMT400012845 | Potato | cytosol | 68.99 | 64.32 |
| Solyc08g048300.1.1 | Tomato | cytosol | 16.2 | 63.04 |
| KXG19525 | Sorghum | cytosol | 70.67 | 60.53 |
| VIT_00s0174g00280.t01 | Wine grape | extracellular | 60.61 | 60.45 |
| TraesCS3D01G441200.1 | Wheat | extracellular, golgi | 71.51 | 60.09 |
| GSMUA_Achr5P11490_001 | Banana | cytosol | 51.12 | 51.12 |
| GSMUA_Achr7P07160_001 | Banana | cytosol | 50.56 | 50.56 |
| GSMUA_Achr9P27270_001 | Banana | cytosol | 47.77 | 48.17 |
| GSMUA_Achr4P12970_001 | Banana | cytosol | 46.37 | 46.5 |
| Solyc12g055820.1.1 | Tomato | cytosol | 68.44 | 46.49 |
| GSMUA_Achr10P... | Banana | cytosol | 45.81 | 45.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.37 | 45.86 |
| GSMUA_Achr9P30860_001 | Banana | cytosol | 47.77 | 45.84 |
| GSMUA_Achr4P06150_001 | Banana | cytosol | 44.97 | 45.1 |
| OQU75994 | Sorghum | cytosol | 21.23 | 42.46 |
| Zm00001d002250_P001 | Maize | plastid | 68.16 | 7.79 |
Protein Annotations
| Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:50.1.1 | InterPro:ADH_C | InterPro:ADH_N | InterPro:ADH_Zn_CS |
| InterPro:D-isomer_DH_CS1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr4G26450_001 | EnsemblPlants:GSMUA_Achr4P26450_001 |
| EnsemblPlants:GSMUA_Achr4T26450_001 | InterPro:GroES-like_sf | UniProt:M0SSA7 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 | PFAM:PF08240 |
| InterPro:PKS_ER | ScanProsite:PS00059 | ScanProsite:PS00065 | PANTHER:PTHR42683 | PANTHER:PTHR42683:SF17 | SMART:SM00829 |
| SUPFAM:SSF50129 | SUPFAM:SSF51735 | UniParc:UPI00029637CC | SEG:seg | : | : |
Description
Probable cinnamyl alcohol dehydrogenase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G26450_001]
Coordinates
chr4:-:25746356..25747904
Molecular Weight (calculated)
38621.4 Da
IEP (calculated)
6.963
GRAVY (calculated)
-0.009
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEAGTGDC LAWAARDASG TLSPYRFTRR ALRGDDVSLR ITHCGVCYAD VLWTRNKIGD SKYPLVPGHE IVGVVTATGS GVKDLRAGDH VGVGTYVNSC
101: RECVYCNEFC EVFCSKGATF TFNGMDSDGT VTKGGYSSYI VVHERQVMYC YKIPDGYPPD RAAPLLCAGI TVYSPMMRHR MNQPGKSLGV IGLGGLGHLA
201: VKFGKAFGLQ VTVFSTSESK RGEALDLLGA DKFVISSNKQ EMESLAKSLD FIIDTASGAH PFDPYMSLLK VHGVLVLVGF PGEVRLSPLS LLHGAKTISG
301: SATGGTKETQ EMLDFCAANK VYPEIEVIKI QDINEALDRL VNKDVKYRFV IDIANSLD
101: RECVYCNEFC EVFCSKGATF TFNGMDSDGT VTKGGYSSYI VVHERQVMYC YKIPDGYPPD RAAPLLCAGI TVYSPMMRHR MNQPGKSLGV IGLGGLGHLA
201: VKFGKAFGLQ VTVFSTSESK RGEALDLLGA DKFVISSNKQ EMESLAKSLD FIIDTASGAH PFDPYMSLLK VHGVLVLVGF PGEVRLSPLS LLHGAKTISG
301: SATGGTKETQ EMLDFCAANK VYPEIEVIKI QDINEALDRL VNKDVKYRFV IDIANSLD
001: MSSSESVENE CMCWAARDPS GLLSPHTITR RSVTTDDVSL TITHCGVCYA DVIWSRNQHG DSKYPLVPGH EIAGIVTKVG PNVQRFKVGD HVGVGTYVNS
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK
Arabidopsis Description
CAD1CAD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLT3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.