Factsheet for GSMUA_Achr9P30860_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	70.51	72.65
GSMUA_Achr9P27270_001	Banana	cytosol	62.47	65.63
GSMUA_Achr7P07160_001	Banana	cytosol	61.66	64.25
GSMUA_Achr5P11490_001	Banana	cytosol	56.57	58.94
GSMUA_Achr10P...	Banana	cytosol	54.42	56.86
GSMUA_Achr1P00850_001	Banana	cytosol	46.92	49.02
GSMUA_Achr4P12970_001	Banana	cytosol	46.38	48.46
GSMUA_Achr4P06150_001	Banana	cytosol	46.11	48.18
GSMUA_Achr4P26450_001	Banana	cytosol	45.84	47.77

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr9G30860_001	EnsemblPlants:GSMUA_Achr9P30860_001	EnsemblPlants:GSMUA_Achr9T30860_001
InterPro:GroES-like_sf	UniProt:M0U4Z3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF26	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI0002962CF2	SEG:seg	:	:	:	:

Description

Probable cinnamyl alcohol dehydrogenase 9 [Source:GMGC_GENE;Acc:GSMUA_Achr9G30860_001]

Coordinates

chr9:-:33980387..33983224

Molecular Weight (calculated)

39965.1 Da

IEP (calculated)

6.232

GRAVY (calculated)

-0.069

Length

373 amino acids

Sequence
(BLAST)

001: MGEAATENGV RKATSPEEEH PRKAFGWAAR DASGLFSPFA FSRRNNGDED VTIKILYCGM CHSDLHVARN EWARTAYPVV PGHEIVGMVT QVGGSVQKFK
101: VGDRVGVGCM VNSCRSGSCH GCQQGLENHC PGLVFTYNSV NVDGTMTYGG YSDMIVVDQH FVIRFPENMP SDSGAPLLCA GITVYAPMKY HGLDQPGKHL
201: GVVGLGGLGH VAVRFGKALG MKVTVISSSP GKEKEATERL GADDFLVSSD PGRMQAAMGT MDGIIDTVSA VHDVTPLMFL LKTRGKMIMA GAPEKPLQLD
301: AFSLIIGEKS IAGTCIGGVK ETQEMIDFAA EHNITADIEL VSMDRVNEAM ERLSKGDVRY RFVIDIGNTL TAA

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.