Factsheet for GSMUA_Achr10P17960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P27270_001	Banana	cytosol	60.22	60.56
GSMUA_AchrUn_...	Banana	cytosol	57.42	56.63
Os03t0223200-00	Rice	cytosol	59.94	56.02
GSMUA_Achr7P07160_001	Banana	cytosol	55.18	55.03
GSMUA_Achr9P30860_001	Banana	cytosol	56.86	54.42
GSMUA_Achr5P11490_001	Banana	cytosol	50.42	50.28
GSMUA_Achr4P06150_001	Banana	cytosol	46.5	46.5
GSMUA_Achr4P12970_001	Banana	cytosol	45.94	45.94
GSMUA_Achr4P26450_001	Banana	cytosol	45.94	45.81
GSMUA_Achr1P00850_001	Banana	cytosol	45.66	45.66

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G17960_001	EnsemblPlants:GSMUA_Achr10P17960_001	EnsemblPlants:GSMUA_Achr10T17960_001
InterPro:GroES-like_sf	UniProt:M0RJ71	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF15	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI0002954B30	SEG:seg	:	:	:	:

Description

Probable cinnamyl alcohol dehydrogenase 9 [Source:GMGC_GENE;Acc:GSMUA_Achr10G17960_001]

Coordinates

chr10:-:24935217..24936909

Molecular Weight (calculated)

38502.8 Da

IEP (calculated)

6.730

GRAVY (calculated)

0.063

Length

357 amino acids

Sequence
(BLAST)

001: MEEEETGHGW AARDSTGVLS PFAFPLRAMK GDDITLKVLY CGICLTDLCT IKNYWRNAKY PVVPGHEIVG VVTQVGRVVH KFKIGDKVGV GYMAGACRSC
101: DNCRVDDENY CPKLVPVFNS FYPDGTKTYG GFADMVVVNE HFAVRVPETL PLDKVGPLLC AGTTVYTPMK QHGLDQPGKH LGVVGLGGLG HLAVKFGKAF
201: GLRVTVISST PDKEKDAVEL LGADSFIVIS NAEQMKAAAG TMDHIVSTSA GALSFSPLVA LLKTHGKIIM VGTSTKPMEI PSFDLVSGGK SIVGSMIGGM
301: KVAQEMMEFA SEHRVTPEVE VVRMEDVNLA MERLEKGDVR YRFVVDVANA FHDSRGV

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.