Factsheet for GSMUA_Achr9P27270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	67.32	66.02
TraesCS5D01G210600.1	Wheat	cytosol	65.35	65.17
TraesCS5B01G202700.1	Wheat	cytosol	64.79	64.61
Os09t0400300-01	Rice	plasma membrane	63.1	64.37
EER98869	Sorghum	cytosol	65.63	64.36
TraesCS5A01G205700.1	Wheat	cytosol	64.51	64.33
EER96708	Sorghum	cytosol	64.79	63.89
Zm00001d020400_P001	Maize	plastid	65.35	63.56
HORVU6Hr1G032760.3	Barley	cytosol	53.52	63.55
TraesCS7D01G184600.1	Wheat	cytosol	36.06	63.37
GSMUA_Achr9P30860_001	Banana	cytosol	65.63	62.47
TraesCS7A01G183000.1	Wheat	cytosol	62.82	62.47
Zm00001d020401_P001	Maize	cytosol	40.56	62.34
GSMUA_Achr7P07160_001	Banana	cytosol	62.82	62.29
TraesCS7D01G184500.1	Wheat	cytosol	62.54	62.18
Os09t0400400-01	Rice	cytosol	63.38	62.15
Os09t0399800-01	Rice	cytosol	62.82	62.12
TraesCS5A01G213900.1	Wheat	plastid	66.76	60.93
TraesCS5B01G209800.2	Wheat	plastid	66.76	60.93
TraesCS5D01G218100.2	Wheat	plastid	66.48	60.82
GSMUA_Achr5P11490_001	Banana	cytosol	60.85	60.34
GSMUA_Achr10P...	Banana	cytosol	60.56	60.22
HORVU5Hr1G062030.9	Barley	cytosol	65.07	60.0
OQU89465	Sorghum	plastid	70.14	59.57
TraesCS5B01G202800.1	Wheat	plastid	68.17	57.48
TraesCS5A01G205600.1	Wheat	plastid	67.89	57.11
TraesCS5D01G210700.1	Wheat	plastid	67.61	57.01
HORVU0Hr1G012860.2	Barley	plastid	67.32	56.77
Os09t0400000-00	Rice	plasma membrane	66.48	54.13
GSMUA_Achr4P12970_001	Banana	cytosol	52.39	52.1
GSMUA_Achr4P06150_001	Banana	cytosol	50.99	50.7
GSMUA_Achr1P00850_001	Banana	cytosol	50.42	50.14
GSMUA_Achr4P26450_001	Banana	cytosol	48.17	47.77
HORVU0Hr1G012940.6	Barley	cytosol	49.58	44.67
Zm00001d020402_P001	Maize	plastid	13.8	40.16

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr9G27270_001	EnsemblPlants:GSMUA_Achr9P27270_001	EnsemblPlants:GSMUA_Achr9T27270_001
InterPro:GroES-like_sf	UniProt:M0U3Y4	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF23	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI00029577D5	SEG:seg	:	:	:	:

Description

Probable mannitol dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr9G27270_001]

Coordinates

chr9:+:31492331..31497301

Molecular Weight (calculated)

38064.0 Da

IEP (calculated)

6.441

GRAVY (calculated)

0.054

Length

355 amino acids

Sequence
(BLAST)

001: MEKQPQVAFG WAARDASGVL APFSFSRRAT GDDDVTLKIL YCGICHTDLH TIENDWGNAM YPVVPGHEIV GTVIDVGRNV QKFKVGDKVG VGYMVGSCGS
101: CESCSEEYEN HCFKMITTSN GVYHDGATTY GGFSDMIVVN EHFAVHIPDN LPLEKTAPLL CAGVTVYSPM KHFGLNEPGK HLGVVGLGGL GHVAVKFGKA
201: YGMKVTVIST SRNKEQEAIQ HLGADSFLVS SDPDQMKAAT GTMDGIIDTV SAFHPIAPLL FLLKARGRMI LVGAPNKPLE LPSFCLIQGG RMLAGGSVGG
301: MKDTQEMIDF AGKHNITAEV EVVGMDYVNT AMVRLAKGDV RYRFVIDVAN TLTTA

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.