Factsheet for HORVU5Hr1G062030.9

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G032760.3	Barley	cytosol	75.84	97.66
TraesCS5D01G218100.2	Wheat	plastid	88.31	87.63
TraesCS5B01G209800.2	Wheat	plastid	88.05	87.15
TraesCS5A01G213900.1	Wheat	plastid	87.79	86.89
EER96708	Sorghum	cytosol	74.55	79.72
Zm00001d020400_P001	Maize	plastid	74.29	78.36
EER98869	Sorghum	cytosol	72.99	77.62
Os09t0400400-01	Rice	cytosol	71.43	75.97
Os09t0399800-01	Rice	cytosol	70.13	75.21
GSMUA_Achr9P27270_001	Banana	cytosol	60.0	65.07
HORVU0Hr1G012860.2	Barley	plastid	69.35	63.42
HORVU0Hr1G012940.6	Barley	cytosol	59.48	58.12
HORVU6Hr1G087220.1	Barley	cytosol	54.29	56.95
HORVU7Hr1G079380.2	Barley	cytosol	54.81	56.72
HORVU1Hr1G007800.1	Barley	cytosol	54.03	56.52
HORVU2Hr1G010840.1	Barley	peroxisome	49.61	53.35
HORVU3Hr1G097160.1	Barley	cytosol	46.23	50.28
HORVU6Hr1G035420.6	Barley	cytosol	47.27	50.0
HORVU3Hr1G097140.1	Barley	cytosol	45.45	49.16
HORVU3Hr1G097060.1	Barley	cytosol, plastid	18.44	46.41
HORVU6Hr1G035410.1	Barley	cytosol	7.27	45.16
HORVU2Hr1G010830.1	Barley	peroxisome	49.35	44.29
HORVU2Hr1G099360.1	Barley	cytosol	8.05	42.47
HORVU2Hr1G099350.2	Barley	cytosol, mitochondrion	20.0	19.15

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	UniProt:A0A287RH67	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EnsemblPlantsGene:HORVU5Hr1G062030
EnsemblPlants:HORVU5Hr1G062030.9	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059
PANTHER:PTHR42683	PANTHER:PTHR42683:SF15	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000B4855F9
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:482985970..483048422

Molecular Weight (calculated)

40009.2 Da

IEP (calculated)

6.975

GRAVY (calculated)

0.126

Length

385 amino acids

Sequence
(BLAST)

001: NTARAPFPGG YSEGNLSAAR TDKQSKQSSM AKGMPAIGWA AKDTSGVLSP YSFSRRAQKD DDVTIKVLFC GICHTDLHIV KNEWGNALYP VVPGHEIVGV
101: VTDVGPGVKN FKAGDTVGVG YFIDSCRSCV SCSSGHDNHC PTLVLTCSAV DYDGATTQGG FSDVLVVDKG YVVRVPEGLP LDGAAPLLCA GVTVYSPMME
201: FGLNAPGKHL GVVGLGGLGH MAVKFGKAFG MTVTVISSSP RKREEAVKRL GADAFLVSQD PEQMKAAAGT MDGIIDTVSA GHPIVPLLEL LKPGGQLVVV
301: GAPSTPLQLP AYAIIGGGKR VAGNLVGSVG SCQAMLDFAA KHGITADVEV VKMDYVNTAV ERLERNDVRY RFVIDVAGSQ LGAAA

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.