Factsheet for Zm00001d020400_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98869	Sorghum	cytosol	91.23	91.99
TraesCS5D01G210600.1	Wheat	cytosol	81.37	83.43
TraesCS5B01G202700.1	Wheat	cytosol	80.82	82.87
TraesCS5A01G205700.1	Wheat	cytosol	80.55	82.58
TraesCS7D01G184600.1	Wheat	cytosol	43.84	79.21
HORVU6Hr1G032760.3	Barley	cytosol	64.66	78.93
TraesCS7D01G184500.1	Wheat	cytosol	75.89	77.59
TraesCS7A01G183000.1	Wheat	cytosol	75.62	77.31
Zm00001d020401_P001	Maize	cytosol	48.22	76.19
TraesCS5D01G218100.2	Wheat	plastid	79.45	74.74
HORVU5Hr1G062030.9	Barley	cytosol	78.36	74.29
TraesCS5A01G213900.1	Wheat	plastid	78.9	74.04
TraesCS5B01G209800.2	Wheat	plastid	78.63	73.78
GSMUA_Achr9P27270_001	Banana	cytosol	63.56	65.35
AT4G37980.1	Thale cress	cytosol	59.45	60.78
Solyc11g011340.1.1	Tomato	cytosol	58.08	59.05
Solyc11g011330.1.1	Tomato	cytosol	57.53	58.99
PGSC0003DMT400040520	Potato	cytosol	49.59	58.96
VIT_00s0346g00080.t01	Wine grape	cytosol	58.36	58.84
VIT_00s0371g00100.t01	Wine grape	cytosol	58.36	58.84
CDX69348	Canola	cytosol	57.53	58.82
CDX75688	Canola	cytosol	57.26	58.54
Bra010626.1-P	Field mustard	cytosol	55.34	58.38
Bra010625.1-P	Field mustard	cytosol	41.1	58.37
CDX90392	Canola	cytosol	56.99	58.26
KRH74457	Soybean	cytosol	57.26	58.22
CDX90391	Canola	cytosol	56.16	58.07
CDY52519	Canola	cytosol	56.16	58.07
Bra011799.1-P	Field mustard	cytosol	56.71	57.98
PGSC0003DMT400040518	Potato	cytosol	56.44	57.87
VIT_00s0371g00040.t01	Wine grape	cytosol	35.62	57.78
AT4G37990.1	Thale cress	cytosol	56.71	57.66
VIT_00s0346g00120.t01	Wine grape	cytosol	56.99	57.62
VIT_00s0371g00050.t01	Wine grape	cytosol	56.71	57.5
VIT_00s0346g00110.t01	Wine grape	cytosol	56.71	57.5
VIT_00s0615g00020.t01	Wine grape	cytosol	56.71	57.5
CDY52520	Canola	cytosol	41.37	57.41
Zm00001d024314_P001	Maize	cytosol	56.44	57.38
Bra010627.1-P	Field mustard	cytosol	52.88	57.27
VIT_00s0371g00010.t01	Wine grape	cytosol	10.96	57.14
KRH39488	Soybean	cytosol	56.99	57.14
Solyc11g010960.1.1	Tomato	cytosol	56.16	57.1
VIT_00s0346g00100.t01	Wine grape	cytosol	56.44	57.06
PGSC0003DMT400013704	Potato	cytosol	55.62	57.02
VIT_00s0371g00060.t01	Wine grape	cytosol	46.85	57.0
KRH74456	Soybean	cytosol	56.44	56.91
VIT_00s0615g00010.t01	Wine grape	cytosol	55.62	56.39
HORVU0Hr1G012940.6	Barley	cytosol	60.82	56.35
PGSC0003DMT400041566	Potato	cytosol	55.34	56.27
VIT_00s1389g00010.t01	Wine grape	cytosol	55.34	56.11
PGSC0003DMT400080827	Potato	cytosol	32.33	55.66
PGSC0003DMT400041563	Potato	cytosol	37.81	55.65
CDY63551	Canola	cytosol	10.14	55.22
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	56.71	55.05
Solyc11g010990.1.1	Tomato	cytosol	53.97	54.87
PGSC0003DMT400041578	Potato	cytosol	54.25	54.85
KRG99878	Soybean	cytosol	54.25	54.85
Solyc11g010980.1.1	Tomato	cytosol	53.7	54.6
Zm00001d002346_P002	Maize	plastid	55.07	54.32
PGSC0003DMT400041573	Potato	cytosol	47.4	53.89
CDX69347	Canola	cytosol	53.42	53.87
AT4G37970.1	Thale cress	cytosol	53.42	53.72
VIT_10s0003g04910.t01	Wine grape	cytosol	53.42	53.72
PGSC0003DMT400043757	Potato	cytosol	16.99	53.45
KRH45510	Soybean	cytosol	43.29	53.38
KRH07586	Soybean	cytosol	42.19	53.29
VIT_00s0218g00010.t01	Wine grape	cytosol	53.42	53.13
Bra011798.1-P	Field mustard	cytosol	52.6	53.04
CDX75687	Canola	cytosol	52.6	53.04
VIT_00s0371g00020.t01	Wine grape	cytosol	7.95	52.73
Zm00001d004443_P001	Maize	extracellular	52.05	52.63
PGSC0003DMT400024954	Potato	cytosol	38.08	51.87
PGSC0003DMT400024956	Potato	cytosol	16.99	51.67
KRH39487	Soybean	cytosol	43.84	51.61
VIT_00s0615g00030.t01	Wine grape	cytosol	55.62	51.01
Zm00001d015618_P001	Maize	extracellular	50.96	50.68
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	22.19	50.0
KRH49728	Soybean	cytosol	29.04	48.4
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	44.38	47.93
KRH45566	Soybean	cytosol	40.0	47.87
KRH45514	Soybean	cytosol	33.7	46.77
Zm00001d045043_P001	Maize	cytosol	45.21	46.61
PGSC0003DMT400041571	Potato	cytosol	17.53	46.04
VIT_00s0371g00070.t01	Wine grape	cytosol	42.47	42.47
Solyc05g024320.1.1	Tomato	cytosol	23.84	41.04
Zm00001d020402_P001	Maize	plastid	13.7	40.98
VIT_18s0001g01160.t01	Wine grape	mitochondrion	16.99	38.51
PGSC0003DMT400043759	Potato	cytosol	7.4	30.34
Zm00001d002250_P001	Maize	plastid	46.03	5.36

Protein Annotations

EntrezGene:100272868	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	UniProt:B4FR97	EMBL:BT039635	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM54863.1	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF15	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI00017B7F5C	EnsemblPlantsGene:Zm00001d020400	EnsemblPlants:Zm00001d020400_P001	EnsemblPlants:Zm00001d020400_T001	SEG:seg	:

Description

Probable cinnamyl alcohol dehydrogenase 6

Coordinates

chr7:-:111430553..111432512

Molecular Weight (calculated)

37962.4 Da

IEP (calculated)

5.809

GRAVY (calculated)

0.152

Length

365 amino acids

Sequence
(BLAST)

001: MEQGGKMAHG WAARDASGLL SPYSFSRRVQ GDDDVTIKVL FCGICHTDLH IIKNEWGNAM YPVVPGHEVV GVVTDVGHGV SKFKAGDTVG VGYFVDSCRS
101: CESCSTGHEN YCPDLVLSSN GVDHHHHDGG ASASATTKGG FSDVLVVSQD FVVRVPESLP PDGAAPLLCA GVTVYSPMVQ YALNGPGKHL GVVGLGGLGH
201: LAVKFGKAFG MTVTVISSSP AKREEALGRL GADAFLVSHD ASQMKAAAAT MDGIIDTVSA GHQIVPLLAL LKPMGQMVVV GAPSTPLELP AYAIITGGKR
301: VAGNGVGSVA DCQAMLDFAA EHGVTADTEV VPMDYVNTAI ERLEKNDVRY RFVVDVAGSQ MDTVA

Best Arabidopsis Sequence Match ( AT4G37980.1 )
(BLAST)

001: MGKVLEKEAF GLAAKDESGI LSPFSFSRRA TGEKDVRFKV LFCGICHTDL SMAKNEWGLT TYPLVPGHEI VGVVTEVGAK VKKFNAGDKV GVGYMAGSCR
101: SCDSCNDGDE NYCPKMILTS GAKNFDDTMT HGGYSDHMVC AEDFIIRIPD NLPLDGAAPL LCAGVTVYSP MKYHGLDKPG MHIGVVGLGG LGHVAVKFAK
201: AMGTKVTVIS TSERKRDEAV TRLGADAFLV SRDPKQMKDA MGTMDGIIDT VSATHPLLPL LGLLKNKGKL VMVGAPAEPL ELPVFPLIFG RKMVVGSMVG
301: GIKETQEMVD LAGKHNITAD IELISADYVN TAMERLAKAD VKYRFVIDVA NTMKPTP

Arabidopsis Description

CAD7ELI3-1 [Source:UniProtKB/TrEMBL;Acc:A0A178V3X8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.