Factsheet for PGSC0003DMT400041571

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043757	Potato	cytosol	56.83	68.1
PGSC0003DMT400024956	Potato	cytosol	55.4	64.17
VIT_00s0371g00020.t01	Wine grape	cytosol	24.46	61.82
PGSC0003DMT400080827	Potato	cytosol	60.43	39.62
PGSC0003DMT400043759	Potato	cytosol	24.46	38.2
PGSC0003DMT400041573	Potato	cytosol	73.38	31.78
Solyc11g010990.1.1	Tomato	cytosol	76.26	29.53
Zm00001d020401_P001	Maize	cytosol	46.04	27.71
PGSC0003DMT400040518	Potato	cytosol	61.87	24.16
PGSC0003DMT400040520	Potato	cytosol	51.08	23.13
PGSC0003DMT400013704	Potato	cytosol	58.99	23.03
PGSC0003DMT400041566	Potato	cytosol	58.27	22.56
PGSC0003DMT400041578	Potato	cytosol	52.52	20.22
PGSC0003DMT400047475	Potato	cytosol	51.8	20.0
TraesCS7D01G376600.1	Wheat	cytosol	51.8	19.57
TraesCS7B01G282100.1	Wheat	cytosol	51.8	19.46
TraesCS6B01G406300.1	Wheat	cytosol	51.08	19.45
TraesCS6A01G369800.1	Wheat	cytosol, golgi	51.08	19.45
TraesCS6D01G353700.1	Wheat	cytosol	51.08	19.4
TraesCS6A01G370100.1	Wheat	cytosol	49.64	19.38
TraesCS7A01G380100.1	Wheat	cytosol	51.08	19.29
TraesCS6B01G406000.1	Wheat	cytosol	50.36	19.13
TraesCS6D01G353300.1	Wheat	cytosol	49.64	18.9
TraesCS7B01G232400.1	Wheat	cytosol, plastid	51.08	18.83
OQU80077	Sorghum	cytosol	50.36	18.77
Os09t0400300-01	Rice	plasma membrane	46.76	18.68
Zm00001d024314_P001	Maize	cytosol	48.2	18.66
TraesCS7A01G350500.1	Wheat	cytosol	49.64	18.6
TraesCS6B01G406200.1	Wheat	cytosol	48.92	18.58
Bra011798.1-P	Field mustard	cytosol	48.2	18.51
CDX69347	Canola	cytosol	48.2	18.51
CDX75687	Canola	cytosol	48.2	18.51
TraesCS6D01G353400.1	Wheat	cytosol	48.92	18.48
TraesCS5D01G210600.1	Wheat	cytosol	46.76	18.26
EER98869	Sorghum	cytosol	47.48	18.23
AT4G37970.1	Thale cress	cytosol	47.48	18.18
TraesCS5B01G202700.1	Wheat	cytosol	46.04	17.98
EER96708	Sorghum	cytosol	46.04	17.78
Os09t0399800-01	Rice	cytosol	45.32	17.55
Zm00001d020400_P001	Maize	plastid	46.04	17.53
TraesCS5A01G205700.1	Wheat	cytosol	44.6	17.42
TraesCS7A01G183000.1	Wheat	cytosol	44.6	17.37
TraesCS7D01G184500.1	Wheat	cytosol	44.6	17.37
TraesCS5D01G218100.2	Wheat	plastid	48.2	17.27
TraesCS5A01G213900.1	Wheat	plastid	48.2	17.22
TraesCS5B01G209800.2	Wheat	plastid	48.2	17.22
Os10t0430200-01	Rice	cytosol	45.32	17.21
Os09t0400400-01	Rice	cytosol	44.6	17.13
TraesCS7D01G328300.1	Wheat	cytosol	50.36	17.07
PGSC0003DMT400033637	Potato	peroxisome	42.45	16.39
PGSC0003DMT400054502	Potato	peroxisome	41.73	16.11
PGSC0003DMT400059621	Potato	cytosol	41.73	16.02
Os03t0223200-00	Rice	cytosol	43.88	15.97
PGSC0003DMT400066217	Potato	cytosol	41.01	15.97
TraesCS5B01G202800.1	Wheat	plastid	48.2	15.91
OQU89465	Sorghum	plastid	47.48	15.79
Os04t0612700-01	Rice	cytosol	42.45	15.57
TraesCS2D01G422400.1	Wheat	cytosol	41.01	15.49
TraesCS2A01G424600.1	Wheat	cytosol	41.01	15.45
TraesCS5D01G210700.1	Wheat	plastid	46.76	15.44
TraesCS5A01G205600.1	Wheat	plastid	46.76	15.4
TraesCS2B01G444200.2	Wheat	cytosol	40.29	15.18
Zm00001d002346_P002	Maize	plastid	40.29	15.14
Os09t0400000-00	Rice	plasma membrane	46.04	14.68
OQU82308	Sorghum	cytosol	39.57	14.47
PGSC0003DMT400012845	Potato	cytosol	38.13	13.8
Os08t0270400-00	Rice	cytosol	21.58	9.87
PGSC0003DMT400024954	Potato	cytosol	12.95	6.72
PGSC0003DMT400041563	Potato	cytosol	5.76	3.23
TraesCS7D01G184600.1	Wheat	cytosol	2.16	1.49
VIT_00s0371g00010.t01	Wine grape	cytosol	0.0	0.0
Zm00001d020402_P001	Maize	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400041571	EnsemblPlantsGene:PGSC0003DMG400016113	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:ADH_C	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR42683	PANTHER:PTHR42683:SF26	PFAM:PF00107
PGSC:PGSC0003DMG400016113	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000296DB9C	UniProt:M1BBJ4	MapMan:50.1.1

Description

Alcohol NADP+ oxidoreductase [Source:PGSC_GENE;Acc:PGSC0003DMG400016113]

Coordinates

chr11:+:2017073..2018074

Molecular Weight (calculated)

15195.0 Da

IEP (calculated)

8.464

GRAVY (calculated)

0.183

Length

139 amino acids

Sequence
(BLAST)

001: MYMSGHKSSD MFAYIETGAT STLDGIIDTV SAEHPIAPLL NILKPHGKLV MVGLPPKPLE LPAWPLLMGR KIMGGSIIGG MEETQEMLDF AAKHNITPQV
101: EVVSLNYVNI TMERLLKLDV KYRFVLGIGK TSKAGCKLI

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.