Factsheet for PGSC0003DMT400012845

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g048300.1.1	Tomato	cytosol	20.83	86.96
VIT_02s0025g03100.t01	Wine grape	cytosol	72.66	78.59
VIT_02s0025g03110.t01	Wine grape	cytosol	14.84	74.03
Zm00001d045043_P001	Maize	cytosol	65.62	71.19
KRH21722	Soybean	cytosol	65.89	70.87
AT1G72680.1	Thale cress	cytosol	65.36	70.7
OQU75993	Sorghum	cytosol	65.1	70.62
KRH10632	Soybean	cytosol	65.62	70.59
EER88001	Sorghum	cytosol	64.84	70.34
EER88002	Sorghum	cytosol	64.58	70.06
Bra016041.1-P	Field mustard	cytosol	64.32	69.77
GSMUA_Achr1P00850_001	Banana	cytosol	64.84	69.75
Os10t0194200-01	Rice	plasma membrane, plastid	64.06	69.49
GSMUA_Achr4P26450_001	Banana	cytosol	64.32	68.99
Os11t0622800-00	Rice	cytosol	63.28	68.64
CDX72936	Canola	cytosol	61.72	67.52
TraesCS3B01G484500.1	Wheat	cytosol	62.24	67.51
TraesCS3A01G448400.1	Wheat	cytosol	61.98	67.23
TraesCS3B01G485000.1	Wheat	cytosol	61.72	66.95
TraesCS3A01G448800.1	Wheat	cytosol	61.98	66.85
HORVU3Hr1G097160.1	Barley	cytosol	61.2	66.38
HORVU3Hr1G097140.1	Barley	cytosol	61.46	66.29
TraesCS3D01G440900.1	Wheat	cytosol	61.46	64.84
OQU79199	Sorghum	cytosol	54.17	64.6
Solyc12g055820.1.1	Tomato	cytosol	87.5	63.76
HORVU3Hr1G097060.1	Barley	cytosol, plastid	25.26	63.4
CDY72501	Canola	cytosol	30.47	62.57
KXG19525	Sorghum	cytosol	65.62	60.29
TraesCS3D01G441200.1	Wheat	extracellular, golgi	61.46	55.4
PGSC0003DMT400080827	Potato	cytosol	29.69	53.77
PGSC0003DMT400041563	Potato	cytosol	33.85	52.42
PGSC0003DMT400047475	Potato	cytosol	48.7	51.94
PGSC0003DMT400040520	Potato	cytosol	41.41	51.79
PGSC0003DMT400041573	Potato	cytosol	43.23	51.71
PGSC0003DMT400040518	Potato	cytosol	47.66	51.4
PGSC0003DMT400041578	Potato	cytosol	47.4	50.42
PGSC0003DMT400013704	Potato	cytosol	46.61	50.28
PGSC0003DMT400041566	Potato	cytosol	46.61	49.86
PGSC0003DMT400024954	Potato	cytosol	33.59	48.13
PGSC0003DMT400043757	Potato	cytosol	14.32	47.41
PGSC0003DMT400033637	Potato	peroxisome	43.75	46.67
PGSC0003DMT400054502	Potato	peroxisome	43.49	46.39
PGSC0003DMT400059621	Potato	cytosol	43.23	45.86
PGSC0003DMT400024956	Potato	cytosol	14.32	45.83
PGSC0003DMT400066217	Potato	cytosol	41.41	44.54
OQU75994	Sorghum	cytosol	20.57	44.13
PGSC0003DMT400041571	Potato	cytosol	13.8	38.13
PGSC0003DMT400043759	Potato	cytosol	6.77	29.21
Zm00001d002250_P001	Maize	plastid	62.76	7.69

Protein Annotations

EntrezGene:102584791	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS	InterPro:D-isomer_DH_CS1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058
GO:GO:0009809	GO:GO:0009987	GO:GO:0016491	GO:GO:0019748	GO:GO:0046872	GO:GO:0055114
InterPro:GroES-like_sf	UniProt:M1A1V9	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400005001
PGSC:PGSC0003DMG400005001	EnsemblPlants:PGSC0003DMT400012845	InterPro:PKS_ER	ScanProsite:PS00059	ScanProsite:PS00065	PANTHER:PTHR42683
PANTHER:PTHR42683:SF17	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000294FC03	SEG:seg

Description

Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400005001]

Coordinates

chr12:-:53419567..53421274

Molecular Weight (calculated)

41878.7 Da

IEP (calculated)

5.700

GRAVY (calculated)

0.193

Length

384 amino acids

Sequence
(BLAST)

001: MTSASANENC LGWAARDPSG VLSPYEFNRR AVSSDDVLLD IAFCGMCFAD VLWTRNILGT SKYPLVPGHE ITGIVREVGT DVKHFKVGDL VGVGTYVNSC
101: RECEYCCDEL EVHCSEGAIN TFDGIDVDGT VTKGGYSSYI VVNERYCFRI PENYPLASAA PLLCAGITVY TPMIRHNMNQ PGKSLGVVGL GGLGHLAVKF
201: GKAFGLKVTV FSTSISKREE AINVLGADKF VISSDEQQMM ALSKSFDFII NTASGDIPFD TYLSLLKTAG VLVLVGFPSE VKFIPGNLIL GIIFYICSQF
301: EARLCSICRT LAKNESFLAG MKSIVGSVTG GTKQTQEMLD FCASHKIYPE IEIVPIQYVN EALERLMKKD VKYRFVIDVA NSIK

Best Arabidopsis Sequence Match ( AT1G72680.1 )
(BLAST)

001: MSSSESVENE CMCWAARDPS GLLSPHTITR RSVTTDDVSL TITHCGVCYA DVIWSRNQHG DSKYPLVPGH EIAGIVTKVG PNVQRFKVGD HVGVGTYVNS
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK

Arabidopsis Description

CAD1CAD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.