Factsheet for PGSC0003DMT400054502

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g069250.2.1	Tomato	peroxisome	94.72	94.72
PGSC0003DMT400033637	Potato	peroxisome	74.72	74.72
GSMUA_Achr5P11490_001	Banana	cytosol	73.06	73.46
KRH17471	Soybean	cytosol	72.22	72.02
KRH05985	Soybean	cytosol	69.17	68.78
Os04t0229100-01	Rice	cytosol	67.5	67.5
EES10404	Sorghum	cytosol	67.22	66.85
HORVU2Hr1G010840.1	Barley	peroxisome	64.44	64.8
TraesCS2D01G064900.1	Wheat	peroxisome	63.89	64.25
Zm00001d004443_P001	Maize	extracellular	63.89	63.71
TraesCS2A01G066500.1	Wheat	peroxisome	63.61	63.61
TraesCS2A01G066400.1	Wheat	peroxisome	63.61	63.61
TraesCS2D01G069800.1	Wheat	peroxisome	63.33	63.51
TraesCS2B01G084600.1	Wheat	peroxisome	63.33	63.33
TraesCS2B01G084500.1	Wheat	cytosol	50.83	63.32
TraesCS2B01G078600.1	Wheat	cytosol	56.94	63.27
TraesCS2A01G070900.1	Wheat	peroxisome	63.06	63.23
PGSC0003DMT400059621	Potato	cytosol	61.94	61.6
TraesCS2B01G078700.1	Wheat	cytosol	64.17	58.78
PGSC0003DMT400041566	Potato	cytosol	55.83	55.99
PGSC0003DMT400047475	Potato	cytosol	55.28	55.28
PGSC0003DMT400080827	Potato	cytosol	32.22	54.72
PGSC0003DMT400040518	Potato	cytosol	53.33	53.93
PGSC0003DMT400041578	Potato	cytosol	53.89	53.74
HORVU2Hr1G010830.1	Barley	peroxisome	63.89	53.61
PGSC0003DMT400040520	Potato	cytosol	45.28	53.09
PGSC0003DMT400013704	Potato	cytosol	52.5	53.09
PGSC0003DMT400041563	Potato	cytosol	36.39	52.82
PGSC0003DMT400043757	Potato	cytosol	16.39	50.86
PGSC0003DMT400041573	Potato	cytosol	45.28	50.78
PGSC0003DMT400024956	Potato	cytosol	15.83	47.5
PGSC0003DMT400066217	Potato	cytosol	46.39	46.78
PGSC0003DMT400024954	Potato	cytosol	34.44	46.27
PGSC0003DMT400012845	Potato	cytosol	46.39	43.49
PGSC0003DMT400041571	Potato	cytosol	16.11	41.73
PGSC0003DMT400043759	Potato	cytosol	8.61	34.83

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1BWF9	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400021152	PGSC:PGSC0003DMG400021152	EnsemblPlants:PGSC0003DMT400054502	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF4	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI0002955D73	SEG:seg	:	:	:	:

Description

Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400021152]

Coordinates

chr2:-:28375993..28378541

Molecular Weight (calculated)

39481.7 Da

IEP (calculated)

7.697

GRAVY (calculated)

-0.076

Length

360 amino acids

Sequence
(BLAST)

001: MAKTTPNHTQ AVSGWAALDS SGKITPYIFN RRENGVNDVT IKILYCGICH TDLHYAKNDW GITMYPVVPG HEITGIVVEV GSNVSSFKTG DKVGVGCMSA
101: SCLQCESCKN SEENYCDKVQ FTYNGVFWDG SITYGGYSKM LVADYRFVVA VPDNLPMDRA APLLCAGVTV FSPMKDNNLI GSQRQNIGVI GLGGLGHLAI
201: KFAKAFGHHV TVISTSLSKE KEAKTKLGAD DFIVSSNAQQ MKSRHRTLDF ILDTVSANHS LGPYLELLKI KGTFVIVGAP EKPMDLPSFP LIFGKRTVKG
301: SMIGSIKETQ EMIDICGKYN IMCDIEIVTP DKINEAYERI EKNDIKYRFV IDIAGQSSKF

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.