Factsheet for PGSC0003DMT400047475

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g078440.2.1	Tomato	cytosol	94.17	86.7
Solyc03g078430.1.1	Tomato	extracellular, plastid, vacuole	46.11	79.81
Bra033613.1-P	Field mustard	cytosol	79.44	79.44
CDY56752	Canola	cytosol	79.44	79.44
CDX72704	Canola	cytosol	79.17	79.17
VIT_04s0044g00190.t01	Wine grape	cytosol	78.06	78.27
KRH43378	Soybean	cytosol	75.0	75.84
AT4G39330.1	Thale cress	cytosol	75.83	75.83
VIT_04s0044g00210.t01	Wine grape	cytosol	75.28	75.49
KRH59514	Soybean	cytosol	74.72	74.72
Bra031216.1-P	Field mustard	cytosol	73.61	74.02
CDX76968	Canola	cytosol	73.06	73.46
CDY13791	Canola	cytosol	72.5	72.91
AT2G21730.1	Thale cress	peroxisome	71.39	68.35
AT2G21890.1	Thale cress	cytosol	70.83	68.0
PGSC0003DMT400040520	Potato	cytosol	56.11	65.8
PGSC0003DMT400043757	Potato	cytosol	20.83	64.66
PGSC0003DMT400041578	Potato	cytosol	64.44	64.27
PGSC0003DMT400041573	Potato	cytosol	56.67	63.55
PGSC0003DMT400041563	Potato	cytosol	43.61	63.31
PGSC0003DMT400040518	Potato	cytosol	62.22	62.92
PGSC0003DMT400080827	Potato	cytosol	36.94	62.74
PGSC0003DMT400041566	Potato	cytosol	62.22	62.4
PGSC0003DMT400013704	Potato	cytosol	61.11	61.8
PGSC0003DMT400024956	Potato	cytosol	20.28	60.83
EER98870	Sorghum	cytosol	16.11	59.18
PGSC0003DMT400054502	Potato	peroxisome	55.28	55.28
PGSC0003DMT400033637	Potato	peroxisome	55.28	55.28
PGSC0003DMT400024954	Potato	cytosol	40.83	54.85
PGSC0003DMT400059621	Potato	cytosol	52.78	52.49
PGSC0003DMT400066217	Potato	cytosol	51.67	52.1
PGSC0003DMT400041571	Potato	cytosol	20.0	51.8
PGSC0003DMT400012845	Potato	cytosol	51.94	48.7
PGSC0003DMT400043759	Potato	cytosol	9.17	37.08

Protein Annotations

EntrezGene:102584649	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1BKT9
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400018446	PGSC:PGSC0003DMG400018446	EnsemblPlants:PGSC0003DMT400047475
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF12	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI00029653FA	RefSeq:XP_006355137.1	SEG:seg	:	:

Description

Cinnamyl alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400018446]

Coordinates

chr3:+:32159423..32162679

Molecular Weight (calculated)

38955.1 Da

IEP (calculated)

6.230

GRAVY (calculated)

0.007

Length

360 amino acids

Sequence
(BLAST)

001: MAKRAENEQP QKAFGWAARD PSGILSPFHF SRRENGDDDV TVKIHYCGIC HSDLHSLKNE WGFTKYPILP GHEIVGFVTA VGSSVHKFKV GDRVGVGVIV
101: GSCQTCDICE QSLENYCPNV IFTYNSTDHD GTNTYGGYSD MIVVHQRFVL QFPENLPSDA GAPLLCAGIT VYSPMKYYGM TEPGKHLGVA GLGGLGHIAV
201: KIGKAFGLKV TVISTSPKKE DEAINKLGAD AFVLSSDPAK LKAAVNTMDY IIDTIAAVHP LAPLLSLLKM DGKLVTLGLP EKPLELPIFP LVLGRKLVGG
301: SDIGGMKETQ EMLDFCAKHN ITADIELISV DNINMAMERL AESDVKYRFV IDIANSLSPS

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.