Factsheet for PGSC0003DMT400080827

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043757	Potato	cytosol	43.4	79.31
PGSC0003DMT400024956	Potato	cytosol	43.87	77.5
VIT_00s0371g00020.t01	Wine grape	cytosol	17.45	67.27
PGSC0003DMT400041571	Potato	cytosol	39.62	60.43
PGSC0003DMT400040518	Potato	cytosol	95.28	56.74
PGSC0003DMT400013704	Potato	cytosol	91.51	54.49
PGSC0003DMT400041573	Potato	cytosol	75.94	50.16
PGSC0003DMT400041566	Potato	cytosol	76.42	45.13
PGSC0003DMT400040520	Potato	cytosol	61.79	42.67
PGSC0003DMT400041578	Potato	cytosol	72.64	42.66
PGSC0003DMT400043759	Potato	cytosol	17.45	41.57
PGSC0003DMT400047475	Potato	cytosol	62.74	36.94
Zm00001d024314_P001	Maize	cytosol	62.26	36.77
CDX69347	Canola	cytosol	62.26	36.46
TraesCS6A01G370100.1	Wheat	cytosol	60.85	36.24
TraesCS6D01G353700.1	Wheat	cytosol	62.26	36.07
Bra011798.1-P	Field mustard	cytosol	61.32	35.91
CDX75687	Canola	cytosol	61.32	35.91
TraesCS6A01G369800.1	Wheat	cytosol, golgi	61.79	35.89
AT4G37970.1	Thale cress	cytosol	61.32	35.81
TraesCS6B01G406200.1	Wheat	cytosol	61.79	35.79
TraesCS7B01G282100.1	Wheat	cytosol	62.26	35.68
TraesCS6B01G406300.1	Wheat	cytosol	61.32	35.62
TraesCS7D01G376600.1	Wheat	cytosol	61.79	35.6
TraesCS7A01G380100.1	Wheat	cytosol	61.79	35.6
TraesCS6B01G406000.1	Wheat	cytosol	61.32	35.52
TraesCS6D01G353300.1	Wheat	cytosol	60.85	35.34
TraesCS6D01G353400.1	Wheat	cytosol	61.32	35.33
TraesCS5D01G210600.1	Wheat	cytosol	58.96	35.11
TraesCS7B01G232400.1	Wheat	cytosol, plastid	62.26	35.01
OQU80077	Sorghum	cytosol	61.32	34.85
TraesCS5B01G202700.1	Wheat	cytosol	58.49	34.83
TraesCS5A01G205700.1	Wheat	cytosol	58.49	34.83
TraesCS7A01G350500.1	Wheat	cytosol	60.85	34.77
PGSC0003DMT400024954	Potato	cytosol	43.87	34.7
Os09t0400300-01	Rice	plasma membrane	56.13	34.2
Os10t0430200-01	Rice	cytosol	58.02	33.61
EER98869	Sorghum	cytosol	57.08	33.43
EER96708	Sorghum	cytosol	56.6	33.33
TraesCS7D01G184500.1	Wheat	cytosol	56.13	33.33
TraesCS7A01G183000.1	Wheat	cytosol	55.66	33.05
Os09t0400400-01	Rice	cytosol	56.13	32.87
Os09t0399800-01	Rice	cytosol	55.66	32.87
TraesCS5D01G218100.2	Wheat	plastid	59.43	32.47
TraesCS5A01G213900.1	Wheat	plastid	59.43	32.39
Zm00001d020400_P001	Maize	plastid	55.66	32.33
PGSC0003DMT400054502	Potato	peroxisome	54.72	32.22
TraesCS5B01G209800.2	Wheat	plastid	58.96	32.13
PGSC0003DMT400033637	Potato	peroxisome	54.25	31.94
Os03t0223200-00	Rice	cytosol	57.55	31.94
Os04t0612700-01	Rice	cytosol	57.08	31.93
Zm00001d002346_P002	Maize	plastid	55.66	31.89
PGSC0003DMT400041563	Potato	cytosol	37.26	31.85
TraesCS2D01G422400.1	Wheat	cytosol	55.19	31.79
TraesCS7D01G328300.1	Wheat	cytosol	61.32	31.71
TraesCS2A01G424600.1	Wheat	cytosol	55.19	31.71
TraesCS2B01G444200.2	Wheat	cytosol	54.72	31.44
PGSC0003DMT400059621	Potato	cytosol	52.83	30.94
OQU82308	Sorghum	cytosol	55.19	30.79
PGSC0003DMT400066217	Potato	cytosol	50.0	29.69
PGSC0003DMT400012845	Potato	cytosol	53.77	29.69
OQU89465	Sorghum	plastid	58.49	29.67
TraesCS5B01G202800.1	Wheat	plastid	58.49	29.45
TraesCS5D01G210700.1	Wheat	plastid	57.55	28.98
TraesCS5A01G205600.1	Wheat	plastid	57.55	28.91
Zm00001d020401_P001	Maize	cytosol	30.19	27.71
Os09t0400000-00	Rice	plasma membrane	56.6	27.52
TraesCS7D01G184600.1	Wheat	cytosol	25.94	27.23
Os08t0270400-00	Rice	cytosol	38.21	26.64
Zm00001d020402_P001	Maize	plastid	0.47	0.82
VIT_00s0371g00010.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400080827	EnsemblPlantsGene:PGSC0003DMG400031479	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:ADH_C	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR42683	PANTHER:PTHR42683:SF26
PFAM:PF00107	PGSC:PGSC0003DMG400031479	SEG:seg	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000296CAE0
UniProt:M1D408	MapMan:50.1.1	:	:	:	:

Description

Cinnamyl alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400031479]

Coordinates

chr11:-:1521018..1521913

Molecular Weight (calculated)

22959.2 Da

IEP (calculated)

8.434

GRAVY (calculated)

0.141

Length

212 amino acids

Sequence
(BLAST)

001: MTHNGVYTDG TPTYGGYSDI MVTNEHYVVH WPENLPMEAA PLLCAGITTY SPLRYFGLDK PGMHIGVVGL GGLGHMAVKF AKAFGTKVTV ISTSGASGSL
101: DGIINTVSAI HTLLPLINLL KTHGKLVMVG APEKPLELPV FPLLLRRKLV AGSAIGRMKE TQEMVDFAAK HNITPDVEVV PMDYVNTALE RLLKSDVKYR
201: FVLDIGNTLN KN

Best Arabidopsis Sequence Match ( AT2G21890.1 )
(BLAST)

001: MVDQNRAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTRNQG GYSDVIVVDH RFVLSIPDGL PSDSGAPLLC AGITVYSPMK YYGMTKESGK RLGVNGLGGL GHIAVKIGKA
201: FGLRVTVISR SSEKEREAID RLGADSFLVT TDSQKMKEAV GTMDFIIDTV SAEHALLPLF SLLKVSGKLV ALGLLEKPLD LPIFPLVLGR KMVGGSQIGG
301: MKETQEMLEF CAKHKIVSDI ELIKMSDINS AMDRLVKSDV RYRFVIDVAN SLLPESSAEI LTEHVDHGVS ITSRF

Arabidopsis Description

CAD3Cinnamyl alcohol dehydrogenase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ10]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.