Factsheet for PGSC0003DMT400033637

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 3
plastid 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g030480.2.1	Tomato	peroxisome	95.83	95.83
VIT_18s0001g14910.t01	Wine grape	cytosol	77.5	77.5
GSMUA_Achr5P11490_001	Banana	cytosol	74.44	74.86
PGSC0003DMT400054502	Potato	peroxisome	74.72	74.72
Os04t0229100-01	Rice	cytosol	68.33	68.33
HORVU2Hr1G010840.1	Barley	peroxisome	66.39	66.76
EES10404	Sorghum	cytosol	66.39	66.02
TraesCS2A01G070900.1	Wheat	peroxisome	65.83	66.02
TraesCS2D01G064900.1	Wheat	peroxisome	65.56	65.92
TraesCS2D01G069800.1	Wheat	peroxisome	65.56	65.74
TraesCS2B01G084600.1	Wheat	peroxisome	65.56	65.56
TraesCS2B01G084500.1	Wheat	cytosol	52.5	65.4
TraesCS2A01G066500.1	Wheat	peroxisome	65.0	65.0
TraesCS2A01G066400.1	Wheat	peroxisome	65.0	65.0
PGSC0003DMT400059621	Potato	cytosol	65.28	64.92
Zm00001d004443_P001	Maize	extracellular	63.89	63.71
TraesCS2B01G078600.1	Wheat	cytosol	57.22	63.58
TraesCS2B01G078700.1	Wheat	cytosol	65.56	60.05
PGSC0003DMT400047475	Potato	cytosol	55.28	55.28
HORVU2Hr1G010830.1	Barley	peroxisome	65.83	55.24
PGSC0003DMT400041566	Potato	cytosol	54.44	54.6
PGSC0003DMT400080827	Potato	cytosol	31.94	54.25
PGSC0003DMT400041578	Potato	cytosol	53.33	53.19
PGSC0003DMT400040520	Potato	cytosol	45.28	53.09
PGSC0003DMT400040518	Potato	cytosol	52.5	53.09
PGSC0003DMT400041563	Potato	cytosol	35.83	52.02
PGSC0003DMT400013704	Potato	cytosol	50.83	51.4
PGSC0003DMT400043757	Potato	cytosol	16.39	50.86
PGSC0003DMT400041573	Potato	cytosol	45.0	50.47
PGSC0003DMT400024956	Potato	cytosol	16.11	48.33
PGSC0003DMT400066217	Potato	cytosol	45.56	45.94
PGSC0003DMT400024954	Potato	cytosol	33.89	45.52
PGSC0003DMT400012845	Potato	cytosol	46.67	43.75
PGSC0003DMT400041571	Potato	cytosol	16.39	42.45
PGSC0003DMT400043759	Potato	cytosol	8.06	32.58

Protein Annotations

EntrezGene:102579562	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1AZF7
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400012919	PGSC:PGSC0003DMG400012919	EnsemblPlants:PGSC0003DMT400033637
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF4	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI0002957143	RefSeq:XP_006356896.1	SEG:seg	:	:

Description

Cinnamyl alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400012919]

Coordinates

chr2:+:14831197..14835334

Molecular Weight (calculated)

39506.6 Da

IEP (calculated)

6.567

GRAVY (calculated)

-0.136

Length

360 amino acids

Sequence
(BLAST)

001: MAQATPNHTQ TVAGWAAHDS SGKITPFNFK RRENGENDVT IEILYCGICH TDIHHVKDDW GITKYPVVPG HEITGIITKV GSNVSKFKMG DRVGVGCLAA
101: TCLKCEYCEE SQENYCDQVE FTYNGIFWDG SITYGGYSKM LVADHRYVVR IPDNMAMDRA APLLCAGITV FTPLKDNNLV DTKGKKIGII GLGGLGHVAV
201: KFGKAFGHHV TVISTSPIKE QEAKDNLGAD DFIISTNPKQ MLEKKRTLDF ILDTVSAKHS LGSYLELLKV NGTLVIVGAP DKPIDLPAFP MIFGKRTVKG
301: SMIGSIEETQ EMMDLCGKHN ILSDIEIITT DQINEGLERL AKNDVKYRFV IDIAGPSSHL

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.