Factsheet for TraesCS2B01G078600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G064900.1	Wheat	peroxisome	94.14	85.2
TraesCS2A01G066500.1	Wheat	peroxisome	93.83	84.44
TraesCS2A01G066400.1	Wheat	peroxisome	93.83	84.44
HORVU2Hr1G010840.1	Barley	peroxisome	92.59	83.8
TraesCS2B01G084500.1	Wheat	cytosol	70.37	78.89
Os04t0229100-01	Rice	cytosol	85.49	76.94
TraesCS2B01G078700.1	Wheat	cytosol	93.21	76.84
EES10404	Sorghum	cytosol	83.64	74.86
Zm00001d004443_P001	Maize	extracellular	80.56	72.3
TraesCS2B01G084600.1	Wheat	peroxisome	77.78	70.0
HORVU2Hr1G010830.1	Barley	peroxisome	91.67	69.23
GSMUA_Achr5P11490_001	Banana	cytosol	72.84	65.92
VIT_18s0001g14910.t01	Wine grape	cytosol	67.28	60.56
Solyc02g030480.2.1	Tomato	peroxisome	63.89	57.5
PGSC0003DMT400033637	Potato	peroxisome	63.58	57.22
PGSC0003DMT400054502	Potato	peroxisome	63.27	56.94
KRH05985	Soybean	cytosol	63.58	56.91
KRH17471	Soybean	cytosol	62.96	56.51
Solyc02g069250.2.1	Tomato	peroxisome	62.65	56.39
PGSC0003DMT400059621	Potato	cytosol	56.48	50.55
Solyc08g014360.1.1	Tomato	plastid	56.48	48.16
TraesCS6B01G406200.1	Wheat	cytosol	52.47	46.45
TraesCS5B01G202700.1	Wheat	cytosol	50.93	46.35
TraesCS2B01G444200.2	Wheat	cytosol	52.78	46.34
TraesCS7B01G282100.1	Wheat	cytosol	52.78	46.22
TraesCS6B01G406000.1	Wheat	cytosol	51.85	45.9
TraesCS6B01G406300.1	Wheat	cytosol	51.23	45.48
TraesCS7B01G232400.1	Wheat	cytosol, plastid	52.78	45.36
TraesCS3B01G485000.1	Wheat	cytosol	49.07	44.92
TraesCS3B01G484500.1	Wheat	cytosol	47.53	43.5
TraesCS5B01G209800.2	Wheat	plastid	50.62	42.16
TraesCS6B01G201600.1	Wheat	cytosol	45.37	40.83
TraesCS5B01G202800.1	Wheat	plastid	51.54	39.67

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF4	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS2B01G078600	EnsemblPlants:TraesCS2B01G078600.1	TIGR:cd05283	SEG:seg	:

Description

No Description!

Coordinates

chr2B:+:44027687..44029024

Molecular Weight (calculated)

35099.5 Da

IEP (calculated)

8.232

GRAVY (calculated)

-0.072

Length

324 amino acids

Sequence
(BLAST)

001: MEVTPNHTQA VSGWAAMEPS GKVMPFAFKR RENGVDDVTI KVHYCGMCHT DLHFINNDWG ITMYPLVPGH EITGVVTRVG ANVSGFRPGD RVGVGCIAAS
101: CLDCDHCRRS EENYCDKVAL TYNGIFWDGS VTYGGYSSML VAHKRFLVRI PDALQLDVAA PLLCAGITVY SPMKQHGMLH AGRRLGVVGL GGLGHVAVKF
201: GKAFGLKVTV ISTSPAKERE ARESLKADDF VLSTDERQMQ GMARSLDYVI DTVSAQHSLG PILELLKVNG KLVLVAAPDK PVELPSFPLI FGKRTVSGSM
301: TGGMKELDAG DDGPVRGARH HRRH

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.