Factsheet for TraesCS2B01G084600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G069800.1	Wheat	peroxisome	96.39	96.66
TraesCS2A01G070900.1	Wheat	peroxisome	95.56	95.82
TraesCS2B01G084500.1	Wheat	cytosol	76.39	95.16
TraesCS2B01G078600.1	Wheat	cytosol	70.0	77.78
TraesCS2B01G078700.1	Wheat	cytosol	80.28	73.54
GSMUA_Achr5P11490_001	Banana	cytosol	73.06	73.46
VIT_18s0001g14910.t01	Wine grape	cytosol	69.44	69.44
PGSC0003DMT400033637	Potato	peroxisome	65.56	65.56
Solyc02g030480.2.1	Tomato	peroxisome	65.56	65.56
KRH17471	Soybean	cytosol	65.56	65.37
KRH05985	Soybean	cytosol	64.72	64.36
PGSC0003DMT400054502	Potato	peroxisome	63.33	63.33
Solyc02g069250.2.1	Tomato	peroxisome	62.5	62.5
PGSC0003DMT400059621	Potato	cytosol	60.28	59.94
Solyc08g014360.1.1	Tomato	plastid	60.28	57.11
TraesCS5B01G202700.1	Wheat	cytosol	53.89	54.49
TraesCS6B01G406200.1	Wheat	cytosol	54.17	53.28
TraesCS7B01G282100.1	Wheat	cytosol	54.44	52.97
TraesCS6B01G406300.1	Wheat	cytosol	53.61	52.88
TraesCS6B01G406000.1	Wheat	cytosol	53.06	52.19
TraesCS2B01G444200.2	Wheat	cytosol	52.78	51.49
TraesCS7B01G232400.1	Wheat	cytosol, plastid	53.89	51.46
TraesCS5B01G209800.2	Wheat	plastid	55.28	51.16
TraesCS3B01G485000.1	Wheat	cytosol	48.89	49.72
TraesCS3B01G484500.1	Wheat	cytosol	48.06	48.87
TraesCS6B01G201600.1	Wheat	cytosol	47.5	47.5
TraesCS5B01G202800.1	Wheat	plastid	54.17	46.32

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF4	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS2B01G084600	EnsemblPlants:TraesCS2B01G084600.1	TIGR:cd05283	SEG:seg	:

Description

No Description!

Coordinates

chr2B:-:47248919..47250230

Molecular Weight (calculated)

38814.8 Da

IEP (calculated)

6.635

GRAVY (calculated)

-0.034

Length

360 amino acids

Sequence
(BLAST)

001: MEVTPNKHTQ QVSGWAAMDE SGKMVPFNFK RRENGVDDVT IKVLYCGMCH TDLHFAKNHW GITQYPVVPG HEITGVVTKV GANVSGFKPG DRVGVGCLAC
101: SCLDCEQCDS SQENYCDKMG LTYNSVYWDG SITYGGYSSM YVAHKRFVVR VPDGLPLDAA APLLCAGITV YTPMKKHGML RAAGRRLGVV GLGGLGHIAV
201: KFGKAFGLHV TVISTSPAKE QEARGNLKAD DFIISTDDKQ MQAMARKLDY VIDTVPAAHS LGPILELLKV GGALALVAAP DGPLELPSFP LIFGNKTISG
301: SITGGMNDHQ EMMDLCGEHN ITCDIELVSN DGINDAFARL ARNDVRYRFV IDIAGADSRI

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.