Factsheet for PGSC0003DMT400059621

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g014360.1.1	Tomato	plastid	96.69	92.11
GSMUA_Achr5P11490_001	Banana	cytosol	65.19	65.92
PGSC0003DMT400033637	Potato	peroxisome	64.92	65.28
PGSC0003DMT400054502	Potato	peroxisome	61.6	61.94
Os04t0229100-01	Rice	cytosol	60.5	60.83
HORVU2Hr1G010840.1	Barley	peroxisome	59.67	60.34
TraesCS2B01G084600.1	Wheat	peroxisome	59.94	60.28
TraesCS2B01G084500.1	Wheat	cytosol	48.07	60.21
TraesCS2A01G070900.1	Wheat	peroxisome	59.67	60.17
TraesCS2D01G069800.1	Wheat	peroxisome	59.12	59.61
TraesCS2D01G064900.1	Wheat	peroxisome	58.56	59.22
TraesCS2A01G066500.1	Wheat	peroxisome	58.84	59.17
TraesCS2A01G066400.1	Wheat	peroxisome	58.84	59.17
EES10404	Sorghum	cytosol	58.56	58.56
Zm00001d004443_P001	Maize	extracellular	56.35	56.51
TraesCS2B01G078600.1	Wheat	cytosol	50.55	56.48
TraesCS2B01G078700.1	Wheat	cytosol	58.56	53.94
PGSC0003DMT400080827	Potato	cytosol	30.94	52.83
PGSC0003DMT400047475	Potato	cytosol	52.49	52.78
PGSC0003DMT400041566	Potato	cytosol	51.38	51.81
PGSC0003DMT400040518	Potato	cytosol	50.0	50.84
PGSC0003DMT400013704	Potato	cytosol	49.45	50.28
PGSC0003DMT400040520	Potato	cytosol	42.54	50.16
HORVU2Hr1G010830.1	Barley	peroxisome	59.12	49.88
PGSC0003DMT400024956	Potato	cytosol	16.3	49.17
PGSC0003DMT400041573	Potato	cytosol	43.37	48.91
PGSC0003DMT400041563	Potato	cytosol	33.43	48.79
PGSC0003DMT400043757	Potato	cytosol	15.47	48.28
PGSC0003DMT400041578	Potato	cytosol	47.79	47.92
PGSC0003DMT400024954	Potato	cytosol	33.7	45.52
PGSC0003DMT400066217	Potato	cytosol	43.37	43.98
PGSC0003DMT400012845	Potato	cytosol	45.86	43.23
PGSC0003DMT400041571	Potato	cytosol	16.02	41.73
PGSC0003DMT400043759	Potato	cytosol	7.18	29.21

Protein Annotations

EntrezGene:102594234	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1C4H6	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
EnsemblPlantsGene:PGSC0003DMG400023169	PGSC:PGSC0003DMG400023169	EnsemblPlants:PGSC0003DMT400059621	InterPro:PKS_ER	PANTHER:PTHR42683	PANTHER:PTHR42683:SF4
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000295FF2C	RefSeq:XP_006351089.1	SEG:seg

Description

Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400023169]

Coordinates

chr8:-:7468712..7475800

Molecular Weight (calculated)

39916.2 Da

IEP (calculated)

8.209

GRAVY (calculated)

-0.124

Length

362 amino acids

Sequence
(BLAST)

001: MANSTPKFTQ SALGWAAHDS SGKLTPFMFK RRENGVEDVT IKILYCGMCR TDVHFAKNDW GNTTYPIVPG YEISGIVIKV GSNVSKFKVG ERVGVGYVAA
101: TCLDCELCNS FQENYCDQMK SVYNSIHWDD TPTYGGYSTI MVADHRYVVH IPESLPMDRA APLMGAGLTV YTAMKNSNLF ESPGKHMAVI GLGGVGHMAI
201: KFGKAFGHHV TVISTSPSKE KDAKDKLDAD GFVLSTDLKQ MQRNRRSLDF IIDTVSAKHS LGPYLELLKV NGTISIVGEP AQPIEVPATP LIYGKKVVRG
301: SIIGSVKELQ EMMNFCGKHN ILCEIELVSI DKINEAFDRL SKNDVKFRFV LNVAAHQYSS RL

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.