Factsheet for PGSC0003DMT400041573

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g010980.1.1	Tomato	cytosol	94.39	84.4
PGSC0003DMT400041563	Potato	cytosol	60.12	77.82
PGSC0003DMT400080827	Potato	cytosol	50.16	75.94
PGSC0003DMT400043757	Potato	cytosol	26.79	74.14
PGSC0003DMT400041571	Potato	cytosol	31.78	73.38
PGSC0003DMT400024956	Potato	cytosol	26.79	71.67
PGSC0003DMT400041566	Potato	cytosol	76.64	68.52
PGSC0003DMT400040518	Potato	cytosol	75.39	67.98
VIT_00s0371g00020.t01	Wine grape	cytosol	11.53	67.27
PGSC0003DMT400013704	Potato	cytosol	73.83	66.57
PGSC0003DMT400040520	Potato	cytosol	62.31	65.15
PGSC0003DMT400041578	Potato	cytosol	69.16	61.5
PGSC0003DMT400047475	Potato	cytosol	63.55	56.67
PGSC0003DMT400024954	Potato	cytosol	45.48	54.48
CDX69347	Canola	cytosol	57.63	51.1
TraesCS6B01G406300.1	Wheat	cytosol	57.63	50.68
CDX75687	Canola	cytosol	57.01	50.55
Bra011798.1-P	Field mustard	cytosol	57.01	50.55
Zm00001d024314_P001	Maize	cytosol	56.39	50.42
AT4G37970.1	Thale cress	cytosol	57.01	50.41
TraesCS6D01G353300.1	Wheat	cytosol	57.32	50.41
TraesCS6A01G369800.1	Wheat	cytosol, golgi	57.32	50.41
TraesCS6B01G406000.1	Wheat	cytosol	57.32	50.27
TraesCS6A01G370100.1	Wheat	cytosol	55.45	50.0
TraesCS5D01G210600.1	Wheat	cytosol	55.14	49.72
TraesCS6D01G353700.1	Wheat	cytosol	56.39	49.45
TraesCS5B01G202700.1	Wheat	cytosol	54.83	49.44
TraesCS5A01G205700.1	Wheat	cytosol	54.83	49.44
OQU80077	Sorghum	cytosol	57.01	49.06
Zm00001d020401_P001	Maize	cytosol	35.2	48.92
EER98869	Sorghum	cytosol	55.14	48.9
TraesCS7B01G282100.1	Wheat	cytosol	56.07	48.65
TraesCS7D01G376600.1	Wheat	cytosol	55.76	48.64
Os09t0400400-01	Rice	cytosol	54.83	48.62
EER96708	Sorghum	cytosol	54.52	48.61
Os09t0399800-01	Rice	cytosol	54.21	48.47
TraesCS7A01G380100.1	Wheat	cytosol	55.45	48.37
TraesCS6D01G353400.1	Wheat	cytosol	55.45	48.37
TraesCS6B01G406200.1	Wheat	cytosol	55.14	48.36
TraesCS7D01G184500.1	Wheat	cytosol	53.58	48.18
Os10t0430200-01	Rice	cytosol	54.83	48.09
TraesCS7A01G350500.1	Wheat	cytosol	55.45	47.98
TraesCS7A01G183000.1	Wheat	cytosol	53.27	47.9
TraesCS7B01G232400.1	Wheat	cytosol, plastid	56.07	47.75
Os09t0400300-01	Rice	plasma membrane	51.71	47.7
TraesCS7D01G184600.1	Wheat	cytosol	29.91	47.52
Zm00001d020400_P001	Maize	plastid	53.89	47.4
TraesCS5B01G209800.2	Wheat	plastid	56.7	46.79
TraesCS5D01G218100.2	Wheat	plastid	56.39	46.65
TraesCS5A01G213900.1	Wheat	plastid	55.76	46.02
Os08t0270400-00	Rice	cytosol	43.3	45.72
PGSC0003DMT400066217	Potato	cytosol	50.78	45.66
TraesCS2A01G424600.1	Wheat	cytosol	52.34	45.53
TraesCS2D01G422400.1	Wheat	cytosol	52.02	45.38
PGSC0003DMT400054502	Potato	peroxisome	50.78	45.28
PGSC0003DMT400033637	Potato	peroxisome	50.47	45.0
TraesCS2B01G444200.2	Wheat	cytosol	51.71	44.99
Zm00001d002346_P002	Maize	plastid	51.71	44.86
Os04t0612700-01	Rice	cytosol	52.02	44.06
OQU82308	Sorghum	cytosol	52.02	43.95
PGSC0003DMT400043759	Potato	cytosol	12.15	43.82
TraesCS5B01G202800.1	Wheat	plastid	57.32	43.71
TraesCS7D01G328300.1	Wheat	cytosol	55.76	43.66
OQU89465	Sorghum	plastid	56.7	43.54
PGSC0003DMT400059621	Potato	cytosol	48.91	43.37
TraesCS5D01G210700.1	Wheat	plastid	56.7	43.23
PGSC0003DMT400012845	Potato	cytosol	51.71	43.23
TraesCS5A01G205600.1	Wheat	plastid	56.39	42.89
Os03t0223200-00	Rice	cytosol	50.47	42.41
Os09t0400000-00	Rice	plasma membrane	57.32	42.2
VIT_00s0371g00010.t01	Wine grape	cytosol	8.1	37.14
Zm00001d020402_P001	Maize	plastid	6.85	18.03

Protein Annotations

EnsemblPlants:PGSC0003DMT400041573	EnsemblPlantsGene:PGSC0003DMG400016114	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:ADH_C	InterPro:ADH_N	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR42683
PANTHER:PTHR42683:SF26	PFAM:PF00107	PFAM:PF08240	PGSC:PGSC0003DMG400016114	SEG:seg	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI000296B66E	UniProt:M1BBJ5	MapMan:50.1.1	:	:

Description

Sinapyl alcohol dehydrogenase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400016114]

Coordinates

chr11:+:2021582..2025494

Molecular Weight (calculated)

34680.2 Da

IEP (calculated)

7.289

GRAVY (calculated)

0.026

Length

321 amino acids

Sequence
(BLAST)

001: MAKSYEIEHP IKAFGWAARD TSGVLSPFNF SRRHEIVGVV TEVGSKVEKV KVGDNVGVGV LVGSCQKCDS CTNDLEQYCP SHIGTYSTTY SDGTTTYGGY
101: SDLMVANEHF VLRWPENLPM EAAPLLCAGI TTYSPLKYFG LDKAGLNIGV VGLGGLGHMA VKFAKAFGCN VTVISTTINK KDEAIKHLGA NSFLISHDQE
201: QMQGATSTLD GIIDTVSAEH PIAPLLNILK PHGKLVMVGA PPKPLELPVF PLLMGRKIMG GSIIGGMKET QEMLDFAAKH KITPEVEVVS MDYVNIAMKR
301: LSKSDVKYRF VLDVGKTLKV D

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.