Factsheet for TraesCS6A01G369800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G353300.1	Wheat	cytosol	96.44	96.44
TraesCS6B01G406000.1	Wheat	cytosol	96.44	96.17
TraesCS6B01G406300.1	Wheat	cytosol	95.62	95.62
HORVU6Hr1G087220.1	Barley	cytosol	95.62	95.1
TraesCS6A01G370100.1	Wheat	cytosol	91.23	93.54
TraesCS7A01G350500.1	Wheat	cytosol	91.78	90.3
TraesCS7A01G380100.1	Wheat	cytosol	90.96	90.22
Zm00001d024314_P001	Maize	cytosol	80.27	81.62
OQU80077	Sorghum	cytosol	82.19	80.43
Os10t0430200-01	Rice	cytosol	79.45	79.23
Os08t0270400-00	Rice	cytosol	65.75	78.95
VIT_00s0346g00080.t01	Wine grape	cytosol	66.85	67.4
VIT_00s0371g00100.t01	Wine grape	cytosol	66.58	67.13
TraesCS2A01G424600.1	Wheat	cytosol	67.67	66.94
VIT_00s0371g00040.t01	Wine grape	cytosol	40.27	65.33
Bra010627.1-P	Field mustard	cytosol	59.73	64.69
CDX90391	Canola	cytosol	62.47	64.59
CDY52519	Canola	cytosol	62.19	64.31
PGSC0003DMT400040520	Potato	cytosol	53.97	64.17
Solyc11g011340.1.1	Tomato	cytosol	63.01	64.07
VIT_00s0346g00110.t01	Wine grape	cytosol	63.01	63.89
VIT_00s0371g00050.t01	Wine grape	cytosol	63.01	63.89
PGSC0003DMT400043757	Potato	cytosol	20.27	63.79
KRH74457	Soybean	cytosol	62.47	63.51
VIT_00s0615g00010.t01	Wine grape	cytosol	62.47	63.33
KRH74456	Soybean	cytosol	62.74	63.26
VIT_00s1389g00010.t01	Wine grape	cytosol	62.19	63.06
AT4G37990.1	Thale cress	cytosol	61.92	62.95
CDY52520	Canola	cytosol	45.21	62.74
VIT_00s0346g00120.t01	Wine grape	cytosol	61.64	62.33
VIT_00s0346g00100.t01	Wine grape	cytosol	61.64	62.33
VIT_00s0615g00020.t01	Wine grape	cytosol	61.37	62.22
PGSC0003DMT400080827	Potato	cytosol	35.89	61.79
PGSC0003DMT400041578	Potato	cytosol	60.55	61.22
KRH45510	Soybean	cytosol	49.59	61.15
VIT_00s0371g00060.t01	Wine grape	cytosol	50.14	61.0
AT4G37980.1	Thale cress	cytosol	59.45	60.78
Bra010626.1-P	Field mustard	cytosol	57.53	60.69
KRG99878	Soybean	cytosol	60.0	60.66
TraesCS7A01G183000.1	Wheat	cytosol	58.63	59.94
CDX90392	Canola	cytosol	58.63	59.94
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	61.64	59.84
Solyc11g011330.1.1	Tomato	cytosol	58.36	59.83
Bra010625.1-P	Field mustard	cytosol	41.92	59.53
KRH07586	Soybean	cytosol	47.12	59.52
PGSC0003DMT400040518	Potato	cytosol	57.81	59.27
Solyc11g010980.1.1	Tomato	cytosol	58.08	59.05
Bra011799.1-P	Field mustard	cytosol	57.53	58.82
CDX69348	Canola	cytosol	57.53	58.82
TraesCS5A01G205700.1	Wheat	cytosol	57.26	58.71
Solyc11g010990.1.1	Tomato	cytosol	57.53	58.5
PGSC0003DMT400013704	Potato	cytosol	56.99	58.43
AT4G37970.1	Thale cress	cytosol	58.08	58.4
VIT_00s0615g00030.t01	Wine grape	cytosol	63.56	58.29
CDX75688	Canola	cytosol	56.99	58.26
Solyc11g010960.1.1	Tomato	cytosol	57.26	58.22
PGSC0003DMT400041566	Potato	cytosol	57.26	58.22
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	25.75	58.02
CDX69347	Canola	cytosol	56.99	57.46
PGSC0003DMT400041573	Potato	cytosol	50.41	57.32
PGSC0003DMT400041563	Potato	cytosol	38.63	56.85
PGSC0003DMT400024956	Potato	cytosol	18.63	56.67
KRH45514	Soybean	cytosol	40.82	56.65
Bra011798.1-P	Field mustard	cytosol	56.16	56.63
CDX75687	Canola	cytosol	56.16	56.63
KRH39488	Soybean	cytosol	56.44	56.59
VIT_10s0003g04910.t01	Wine grape	cytosol	55.89	56.2
VIT_00s0218g00010.t01	Wine grape	cytosol	56.44	56.13
TraesCS5A01G213900.1	Wheat	plastid	58.36	54.76
VIT_00s0371g00010.t01	Wine grape	cytosol	10.41	54.29
TraesCS2A01G066400.1	Wheat	peroxisome	53.42	54.17
TraesCS2A01G066500.1	Wheat	peroxisome	53.42	54.17
TraesCS2A01G070900.1	Wheat	peroxisome	53.15	54.04
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	49.86	53.85
KRH39487	Soybean	cytosol	45.21	53.23
VIT_00s0371g00020.t01	Wine grape	cytosol	7.95	52.73
KRH49728	Soybean	cytosol	31.23	52.05
KRH45566	Soybean	cytosol	43.29	51.8
TraesCS5A01G205600.1	Wheat	plastid	59.73	51.66
PGSC0003DMT400041571	Potato	cytosol	19.45	51.08
PGSC0003DMT400024954	Potato	cytosol	37.26	50.75
TraesCS3A01G448800.1	Wheat	cytosol	49.04	50.28
TraesCS3A01G448400.1	Wheat	cytosol	47.4	48.87
VIT_00s0371g00070.t01	Wine grape	cytosol	48.49	48.49
TraesCS6A01G173700.1	Wheat	cytosol	47.12	47.78
CDY63551	Canola	cytosol	8.49	46.27
Solyc05g024320.1.1	Tomato	cytosol	25.75	44.34
VIT_18s0001g01160.t01	Wine grape	mitochondrion	17.26	39.13
PGSC0003DMT400043759	Potato	cytosol	7.67	31.46

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF26	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS6A01G369800	EnsemblPlants:TraesCS6A01G369800.1	TIGR:cd05283	SEG:seg	:

Description

No Description!

Coordinates

chr6A:-:595023777..595029610

Molecular Weight (calculated)

38888.4 Da

IEP (calculated)

6.889

GRAVY (calculated)

0.036

Length

365 amino acids

Sequence
(BLAST)

001: MAPTAAEQHT RKAVGLAARD ASGHLTPLAI TRRSTGDDDV VIKILYCGIC HSDLHSIKNE WKNAKYPMIP GHEIAGEVTE VGKNVTKFKT GDRVGVGCMV
101: NSCQSCESCN KGFENHCPGI IPTYNTVDLD GTITYGGYSG MVVVHERFVV RFPDTIPLDK GAPLLCAGIT VYSPMKYHGL NVPGMHLGVL GLGGLGHVAV
201: KFGKAFGMKV TVISSSPGKK QEALERLGAD AFVVSKDAEE MKAAMSTMDG IINTVSANIP MAPLLGLLKP NGKMIMVGLP EKPMEIPPFA LVATNKTLAG
301: SCIGGMRDTQ EMLDLAAKHD VTADIEVIDV EYVNTAMERL AKADVRYRFV IDIGNTLDKA AAAAE

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.