CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010625.1-P	Field mustard	cytosol	73.76	75.49
CDX90392	Canola	cytosol	98.1	72.27
CDX69348	Canola	cytosol	86.69	63.87
CDX75688	Canola	cytosol	86.31	63.59
AT4G37980.1	Thale cress	cytosol	85.55	63.03
CDX90391	Canola	cytosol	82.13	61.19
CDY52519	Canola	cytosol	81.75	60.91
CDY56752	Canola	cytosol	63.5	46.39
CDX72704	Canola	cytosol	63.5	46.39
Zm00001d024314_P001	Maize	cytosol	63.12	46.24
TraesCS6A01G370100.1	Wheat	cytosol	61.6	45.51
TraesCS5D01G210600.1	Wheat	cytosol	61.22	45.22
TraesCS6A01G369800.1	Wheat	cytosol, golgi	62.74	45.21
TraesCS6B01G406300.1	Wheat	cytosol	62.74	45.21
TraesCS6B01G406000.1	Wheat	cytosol	62.74	45.08
Os09t0400300-01	Rice	plasma membrane	59.32	44.83
TraesCS5A01G205700.1	Wheat	cytosol	60.46	44.66
TraesCS6D01G353700.1	Wheat	cytosol	61.98	44.54
TraesCS6D01G353300.1	Wheat	cytosol	61.6	44.38
TraesCS7D01G376600.1	Wheat	cytosol	61.98	44.29
TraesCS5B01G202700.1	Wheat	cytosol	59.7	44.1
TraesCS7B01G282100.1	Wheat	cytosol	61.98	44.05
TraesCS7A01G350500.1	Wheat	cytosol	61.98	43.94
CDX69347	Canola	cytosol	60.46	43.92
EER96708	Sorghum	cytosol	60.08	43.89
TraesCS6D01G353400.1	Wheat	cytosol	61.22	43.75
TraesCS7A01G380100.1	Wheat	cytosol	61.22	43.75
OQU80077	Sorghum	cytosol	61.98	43.7
TraesCS7B01G232400.1	Wheat	cytosol, plastid	62.36	43.5
TraesCS6B01G406200.1	Wheat	cytosol	60.46	43.44
CDX75687	Canola	cytosol	59.7	43.37
EER98869	Sorghum	cytosol	59.32	43.09
Os10t0430200-01	Rice	cytosol	59.32	42.62
CDX76968	Canola	cytosol	57.41	42.18
Os09t0399800-01	Rice	cytosol	57.41	42.06
CDY13791	Canola	cytosol	57.03	41.9
Os09t0400400-01	Rice	cytosol	57.41	41.71
Zm00001d002346_P002	Maize	plastid	58.56	41.62
Zm00001d020400_P001	Maize	plastid	57.41	41.37
TraesCS7D01G184500.1	Wheat	cytosol	55.89	41.18
TraesCS7A01G183000.1	Wheat	cytosol	55.89	41.18
TraesCS5A01G213900.1	Wheat	plastid	60.84	41.13
TraesCS5B01G209800.2	Wheat	plastid	60.84	41.13
Os04t0612700-01	Rice	cytosol	58.94	40.9
TraesCS2D01G422400.1	Wheat	cytosol	57.03	40.76
TraesCS5D01G218100.2	Wheat	plastid	60.08	40.72
TraesCS2B01G444200.2	Wheat	cytosol	57.03	40.65
OQU82308	Sorghum	cytosol	58.56	40.53
TraesCS2A01G424600.1	Wheat	cytosol	56.65	40.38
TraesCS7D01G328300.1	Wheat	cytosol	62.74	40.24
TraesCS5A01G205600.1	Wheat	plastid	60.84	37.91
OQU89465	Sorghum	plastid	60.08	37.8
TraesCS5D01G210700.1	Wheat	plastid	60.46	37.77
Os03t0223200-00	Rice	cytosol	54.75	37.7
TraesCS5B01G202800.1	Wheat	plastid	60.08	37.53
Os08t0270400-00	Rice	cytosol	42.97	37.17
Os09t0400000-00	Rice	plasma membrane	60.84	36.7
CDX69037	Canola	cytosol	46.77	34.45
CDX75413	Canola	cytosol	46.39	34.17
CDY46173	Canola	cytosol	47.15	33.97
CDX72936	Canola	cytosol	45.25	33.9
Zm00001d020401_P001	Maize	cytosol	29.66	33.77
CDX99222	Canola	cytosol	46.77	33.61
CDY49288	Canola	cytosol	45.25	33.33
CDX72466	Canola	cytosol	45.25	33.33
TraesCS7D01G184600.1	Wheat	cytosol	23.95	31.19
CDY72501	Canola	cytosol	14.83	20.86
CDY63551	Canola	cytosol	0.0	0.0
Zm00001d020402_P001	Maize	plastid	0.0	0.0

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	GO:A0A078IN98	UniProt:A0A078IN98	InterPro:ADH_C
InterPro:ADH_N	EnsemblPlants:CDY52520	ProteinID:CDY52520	ProteinID:CDY52520.1	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00007204001	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
PANTHER:PTHR42683	PANTHER:PTHR42683:SF27	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0004EEECCD	SEG:seg

Description

BnaC03g61130DBnaC03g61130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN98]

Coordinates

chrLK033098:-:77286..78688

Molecular Weight (calculated)

28596.0 Da

IEP (calculated)

5.352

GRAVY (calculated)

-0.005

Length

263 amino acids

Sequence
(BLAST)

001: MVSSCGSCET CTDDQENYCP KMILTSGGKY YDDTITYGGY SDHMVCEEDY IIRIPENLPL DATAPLLCAG TTVYSPMKYH GLDKPGMHIG VVGLGGLGHV
101: AVKFAKAMGI KVTVISTSDR KRDEALTRLG ADLFLVSRDP EQMKDAMGTM DGIIDTVSAT HPVLPILDLL KYKGKLIMVG APDKPLELPV LPLIFGKKMV
201: VGSMVGGIKE TQEMMDLAGK HNITADIELI SADYVNTAME RLQKADVRYR FVIDVANTLK PSP

Best Arabidopsis Sequence Match ( AT4G37970.1 )
(BLAST)

001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS

Arabidopsis Description

CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.