CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022425.1-P	Field mustard	cytosol	100.0	100.0
CDX99222	Canola	cytosol	98.63	98.36
AT3G19450.1	Thale cress	cytosol	94.25	94.25
VIT_03s0180g00260.t01	Wine grape	cytosol	81.64	83.47
CDX72466	Canola	cytosol	77.26	78.99
Solyc01g107590.2.1	Tomato	cytosol, extracellular	77.26	78.99
VIT_03s0180g00250.t01	Wine grape	cytosol	76.99	78.71
CDY49288	Canola	cytosol	76.99	78.71
PGSC0003DMT400066217	Potato	cytosol	76.99	78.71
CDX69037	Canola	cytosol	76.16	77.87
KRG91021	Soybean	cytosol, nucleus	75.62	77.31
CDX75413	Canola	cytosol	75.62	77.31
KRH35742	Soybean	cytosol, nucleus	75.62	77.09
TraesCS6A01G173700.1	Wheat	cytosol	74.52	75.56
TraesCS6B01G201600.1	Wheat	cytosol	74.52	75.56
Os02t0187800-01	Rice	cytosol	75.07	75.48
TraesCS6D01G162800.1	Wheat	cytosol	74.25	75.28
Zm00001d015618_P001	Maize	extracellular	75.07	74.66
HORVU6Hr1G035420.6	Barley	cytosol	74.25	74.45
GSMUA_Achr4P12970_001	Banana	cytosol	72.33	73.95
KXG29649	Sorghum	cytosol	73.42	73.42
GSMUA_Achr4P06150_001	Banana	cytosol	70.68	72.27
CDY56752	Canola	cytosol	51.23	51.94
CDX72704	Canola	cytosol	50.96	51.67
CDY52519	Canola	cytosol	49.59	51.27
CDX90391	Canola	cytosol	49.59	51.27
CDX75688	Canola	cytosol	48.22	49.3
CDX69348	Canola	cytosol	47.95	49.02
CDX76968	Canola	cytosol	47.4	48.32
CDX90392	Canola	cytosol	47.12	48.18
CDY13791	Canola	cytosol	47.12	48.04
CDY63551	Canola	cytosol	8.77	47.76
CDX75687	Canola	cytosol	47.12	47.51
CDX69347	Canola	cytosol	47.12	47.51
CDY52520	Canola	cytosol	33.97	47.15
CDY72501	Canola	cytosol	22.74	44.38
CDX72936	Canola	cytosol	41.37	43.02

Protein Annotations

MapMan:21.6.1.8	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:A0A078IAG3	UniProt:A0A078IAG3	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EnsemblPlants:CDY46173	ProteinID:CDY46173	ProteinID:CDY46173.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00083364001	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF1	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002547DBD	SEG:seg	:	:

Description

BnaA05g20600DBnaA05g20600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAG3]

Coordinates

chrLK032652:-:139897..142048

Molecular Weight (calculated)

39282.5 Da

IEP (calculated)

5.399

GRAVY (calculated)

0.086

Length

365 amino acids

Sequence
(BLAST)

001: MGSVEGGEKK ALGWAARDPS GVLSPYSYTL RSTGPDDVYI KVICCGICHT DIHQIKNDLG MSNYPMVPGH EVVGEVVEVG SDVSKFTVGD VVGVGVIVGC
101: CGSCKPCSSD LEQYCNKRIW SYNDVYTDGK PTQGGFADTM IVNQKFVVKI PEGMPVEQAA PLLCAGVTVY SPLSHFGLMS SGLRGGILGL GGVGHMGVKI
201: AKAMGHHVTV ISSSERKREE AMDHLGADDY VVSSDQAEMQ RIADSLDYII DTVPVFHPLE PYLACLKLDG KLILMGVINT PLQFITPLVI LGRKVISGSF
301: IGSIKETEEV LAFCKEKGLT STIEVVKIDE LNTAFERLHK NDVRYRFVVD VAGSNLVEEA ATTTK

Best Arabidopsis Sequence Match ( AT3G19450.1 )
(BLAST)

001: MGSVEAGEKK ALGWAARDPS GVLSPYSYTL RSTGADDVYI KVICCGICHT DIHQIKNDLG MSNYPMVPGH EVVGEVLEVG SDVSKFTVGD VVGVGVVVGC
101: CGSCKPCSSE LEQYCNKRIW SYNDVYTDGK PTQGGFADTM IVNQKFVVKI PEGMAVEQAA PLLCAGVTVY SPLSHFGLMA SGLKGGILGL GGVGHMGVKI
201: AKAMGHHVTV ISSSDKKKEE AIEHLGADDY VVSSDPAEMQ RLADSLDYII DTVPVFHPLD PYLACLKLDG KLILMGVINT PLQFVTPLVI LGRKVISGSF
301: IGSIKETEEV LAFCKEKGLT STIETVKIDE LNIAFERLRK NDVRYRFVVD VAGSNLVEEA ATTTN

Arabidopsis Description

CAD4Cinnamyl alcohol dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:P48523]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.