Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G173700.1 | Wheat | cytosol | 99.17 | 99.17 |
| TraesCS6B01G201600.1 | Wheat | cytosol | 99.17 | 99.17 |
| HORVU6Hr1G035420.6 | Barley | cytosol | 96.11 | 95.05 |
| Os02t0187800-01 | Rice | cytosol | 88.06 | 87.33 |
| Zm00001d015618_P001 | Maize | extracellular | 88.89 | 87.19 |
| KXG29649 | Sorghum | cytosol | 86.94 | 85.75 |
| GSMUA_Achr4P06150_001 | Banana | cytosol | 79.17 | 79.83 |
| GSMUA_Achr4P12970_001 | Banana | cytosol | 78.33 | 78.99 |
| VIT_03s0180g00260.t01 | Wine grape | cytosol | 77.78 | 78.43 |
| Solyc01g107590.2.1 | Tomato | cytosol, extracellular | 76.94 | 77.59 |
| PGSC0003DMT400066217 | Potato | cytosol | 76.39 | 77.03 |
| VIT_03s0180g00250.t01 | Wine grape | cytosol | 74.17 | 74.79 |
| CDX72466 | Canola | cytosol | 74.17 | 74.79 |
| Bra017639.1-P | Field mustard | cytosol | 74.17 | 74.79 |
| CDY49288 | Canola | cytosol | 73.89 | 74.51 |
| Bra022425.1-P | Field mustard | cytosol | 75.28 | 74.25 |
| CDY46173 | Canola | cytosol | 75.28 | 74.25 |
| AT4G34230.1 | Thale cress | cytosol | 73.61 | 74.23 |
| KRG91021 | Soybean | cytosol, nucleus | 73.61 | 74.23 |
| CDX99222 | Canola | cytosol | 75.0 | 73.77 |
| KRH35742 | Soybean | cytosol, nucleus | 73.33 | 73.74 |
| CDX69037 | Canola | cytosol | 73.06 | 73.67 |
| Bra011510.1-P | Field mustard | cytosol | 72.78 | 73.39 |
| CDX75413 | Canola | cytosol | 72.5 | 73.11 |
| AT3G19450.1 | Thale cress | cytosol | 73.89 | 72.88 |
| TraesCS7D01G184600.1 | Wheat | cytosol | 29.44 | 52.48 |
| TraesCS7D01G184500.1 | Wheat | cytosol | 51.67 | 52.1 |
| TraesCS5D01G210600.1 | Wheat | cytosol | 51.11 | 51.69 |
| TraesCS2D01G064900.1 | Wheat | peroxisome | 47.78 | 48.04 |
| TraesCS5D01G218100.2 | Wheat | plastid | 51.67 | 47.94 |
| TraesCS6D01G353400.1 | Wheat | cytosol | 48.61 | 47.55 |
| TraesCS6D01G353700.1 | Wheat | cytosol | 48.33 | 47.54 |
| TraesCS2D01G069800.1 | Wheat | peroxisome | 47.22 | 47.35 |
| TraesCS6D01G353300.1 | Wheat | cytosol | 47.5 | 46.85 |
| TraesCS7D01G376600.1 | Wheat | cytosol | 47.22 | 46.2 |
| TraesCS2D01G422400.1 | Wheat | cytosol | 46.94 | 45.92 |
| TraesCS7D01G328300.1 | Wheat | cytosol | 48.06 | 42.2 |
| TraesCS5D01G210700.1 | Wheat | plastid | 49.17 | 42.04 |
| TraesCS3D01G440900.1 | Wheat | cytosol | 41.94 | 41.48 |
| TraesCS3D01G441200.1 | Wheat | extracellular, golgi | 43.33 | 36.62 |
Protein Annotations
| MapMan:21.6.1.8 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | InterPro:ADH_C | InterPro:ADH_N | InterPro:ADH_Zn_CS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009058 | GO:GO:0009809 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0019748 | GO:GO:0045551 |
| GO:GO:0055114 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 | PFAM:PF08240 | InterPro:PKS_ER |
| ScanProsite:PS00059 | PANTHER:PTHR42683 | PANTHER:PTHR42683:SF1 | SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 |
| EnsemblPlantsGene:TraesCS6D01G162800 | EnsemblPlants:TraesCS6D01G162800.1 | TIGR:cd05283 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6D:+:141926351..141930583
Molecular Weight (calculated)
38627.7 Da
IEP (calculated)
6.047
GRAVY (calculated)
0.011
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSVDASETT VTGWAARDAT GHLSPYRYTL RKTGPEDVVL KVKYCGICHT DVHQVKNDLG ASKYPMVPGH EVVGEVVEVG PEVSKFRAGD VVGVGVIVGC
101: CRDCRPCKAN VEQYCNKKIW SYNDVYTDGK PTQGGFASAM VVDQKFVVKI PAGLAPEQAA PLLCAGVTVY SPLKHFGLMT PGLRGGILGL GGVGHMGVKV
201: AKSMGHHVTV ISSSNKKRAE AMDDLGADAY LVSSDTDQMA AAADSLDYII DTVPAKHPLE PYLALLKMDG KLVLMGVIAE PLSFVSPMVM LGRKTITGSF
301: IGSMDETEEV LQFCVDKGLT SQIEVVKMDY VNQAFERLER NDVRYRFVVD VGGSNIEDAA
101: CRDCRPCKAN VEQYCNKKIW SYNDVYTDGK PTQGGFASAM VVDQKFVVKI PAGLAPEQAA PLLCAGVTVY SPLKHFGLMT PGLRGGILGL GGVGHMGVKV
201: AKSMGHHVTV ISSSNKKRAE AMDDLGADAY LVSSDTDQMA AAADSLDYII DTVPAKHPLE PYLALLKMDG KLVLMGVIAE PLSFVSPMVM LGRKTITGSF
301: IGSMDETEEV LQFCVDKGLT SQIEVVKMDY VNQAFERLER NDVRYRFVVD VGGSNIEDAA
001: MGSVEAGEKK ALGWAARDPS GVLSPYSYTL RSTGADDVYI KVICCGICHT DIHQIKNDLG MSNYPMVPGH EVVGEVLEVG SDVSKFTVGD VVGVGVVVGC
101: CGSCKPCSSE LEQYCNKRIW SYNDVYTDGK PTQGGFADTM IVNQKFVVKI PEGMAVEQAA PLLCAGVTVY SPLSHFGLMA SGLKGGILGL GGVGHMGVKI
201: AKAMGHHVTV ISSSDKKKEE AIEHLGADDY VVSSDPAEMQ RLADSLDYII DTVPVFHPLD PYLACLKLDG KLILMGVINT PLQFVTPLVI LGRKVISGSF
301: IGSIKETEEV LAFCKEKGLT STIETVKIDE LNIAFERLRK NDVRYRFVVD VAGSNLVEEA ATTTN
101: CGSCKPCSSE LEQYCNKRIW SYNDVYTDGK PTQGGFADTM IVNQKFVVKI PEGMAVEQAA PLLCAGVTVY SPLSHFGLMA SGLKGGILGL GGVGHMGVKI
201: AKAMGHHVTV ISSSDKKKEE AIEHLGADDY VVSSDPAEMQ RLADSLDYII DTVPVFHPLD PYLACLKLDG KLILMGVINT PLQFVTPLVI LGRKVISGSF
301: IGSIKETEEV LAFCKEKGLT STIETVKIDE LNIAFERLRK NDVRYRFVVD VAGSNLVEEA ATTTN
Arabidopsis Description
CAD4Cinnamyl alcohol dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:P48523]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.