Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G484500.1 | Wheat | cytosol | 94.51 | 97.18 |
| HORVU3Hr1G097160.1 | Barley | cytosol | 93.96 | 96.61 |
| TraesCS3A01G448400.1 | Wheat | cytosol | 93.41 | 96.05 |
| HORVU3Hr1G097060.1 | Barley | cytosol, plastid | 39.29 | 93.46 |
| Zm00001d045043_P001 | Maize | cytosol | 80.77 | 83.05 |
| Os10t0194200-01 | Rice | plasma membrane, plastid | 80.22 | 82.49 |
| OQU75993 | Sorghum | cytosol | 80.22 | 82.49 |
| EER88001 | Sorghum | cytosol | 79.95 | 82.2 |
| EER88002 | Sorghum | cytosol | 78.85 | 81.07 |
| Os11t0622800-00 | Rice | cytosol | 76.37 | 78.53 |
| TraesCS3D01G441200.1 | Wheat | extracellular, golgi | 89.29 | 76.29 |
| VIT_02s0025g03100.t01 | Wine grape | cytosol | 71.15 | 72.96 |
| Bra016041.1-P | Field mustard | cytosol | 69.23 | 71.19 |
| GSMUA_Achr4P26450_001 | Banana | cytosol | 69.78 | 70.95 |
| AT1G72680.1 | Thale cress | cytosol | 68.96 | 70.7 |
| GSMUA_Achr1P00850_001 | Banana | cytosol | 69.23 | 70.59 |
| CDX72936 | Canola | cytosol | 67.31 | 69.8 |
| KXG19525 | Sorghum | cytosol | 79.95 | 69.62 |
| KRH10632 | Soybean | cytosol | 67.31 | 68.63 |
| KRH21722 | Soybean | cytosol | 66.76 | 68.07 |
| CDY72501 | Canola | cytosol | 33.79 | 65.78 |
| VIT_00s0174g00270.t01 | Wine grape | cytosol | 62.64 | 63.87 |
| PGSC0003DMT400012845 | Potato | cytosol | 64.84 | 61.46 |
| VIT_00s0174g00280.t01 | Wine grape | extracellular | 58.52 | 59.33 |
| VIT_02s0025g03110.t01 | Wine grape | cytosol | 12.36 | 58.44 |
| Solyc08g048300.1.1 | Tomato | cytosol | 13.19 | 52.17 |
| OQU75994 | Sorghum | cytosol | 24.73 | 50.28 |
| TraesCS2D01G064900.1 | Wheat | peroxisome | 48.9 | 49.72 |
| TraesCS7D01G184600.1 | Wheat | cytosol | 27.47 | 49.51 |
| TraesCS5D01G210600.1 | Wheat | cytosol | 47.25 | 48.31 |
| TraesCS7D01G184500.1 | Wheat | cytosol | 47.25 | 48.18 |
| TraesCS6D01G353300.1 | Wheat | cytosol | 48.08 | 47.95 |
| TraesCS2D01G069800.1 | Wheat | peroxisome | 47.25 | 47.91 |
| TraesCS7D01G376600.1 | Wheat | cytosol | 48.08 | 47.55 |
| TraesCS6D01G353400.1 | Wheat | cytosol | 47.8 | 47.28 |
| TraesCS2D01G422400.1 | Wheat | cytosol | 47.53 | 47.01 |
| TraesCS6D01G353700.1 | Wheat | cytosol | 47.25 | 46.99 |
| TraesCS5D01G218100.2 | Wheat | plastid | 48.9 | 45.88 |
| Solyc12g055820.1.1 | Tomato | cytosol | 64.29 | 44.4 |
| TraesCS5D01G210700.1 | Wheat | plastid | 50.55 | 43.71 |
| TraesCS7D01G328300.1 | Wheat | cytosol | 48.63 | 43.17 |
| TraesCS6D01G162800.1 | Wheat | cytosol | 41.48 | 41.94 |
| Zm00001d002250_P001 | Maize | plastid | 75.82 | 8.81 |
Protein Annotations
| Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:50.1.1 | InterPro:ADH_C | InterPro:ADH_N | InterPro:ADH_Zn_CS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 | PFAM:PF08240 |
| InterPro:PKS_ER | ScanProsite:PS00059 | PANTHER:PTHR42683 | PANTHER:PTHR42683:SF17 | SMART:SM00829 | SUPFAM:SSF50129 |
| SUPFAM:SSF51735 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS3D01G440900 | EnsemblPlants:TraesCS3D01G440900.1 | TIGR:cd05283 | SEG:seg |
Description
No Description!
Coordinates
chr3D:+:551271726..551273867
Molecular Weight (calculated)
39681.3 Da
IEP (calculated)
6.500
GRAVY (calculated)
-0.050
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFFAVLLPG MAAESESCNC SAWAANDPSG VLSPHSFNRR AVRHDDVSLR ITHCGVCYAD VQWTRNLHHD SVYPLVPGHE IAGVVTEVGS DVKGFKPGDH
101: VAVGTYINSC RDCDNCNNLL ENHCSNFVFT FNGVDTDGTV TKGGYSTHIV VHERYCYKIP DGYPLDKAAP LACAGITVYT PMIRHNMNQP GKSLGVIGLG
201: GLGHMAVKFG KAFGLNVTVL STSESKRDEA INLLGADNFV VSSDKNQMEF LKNSLDFIVD TASGDHPFDP YLALLKVRGT MALVGFPGEI RVHPATLNLG
301: ARTLSGSVVG GTKDTQEMIN FCAANRIYPN VEVIKIDYIN EALERLVNRD VKYRFVIDIE SSFK
101: VAVGTYINSC RDCDNCNNLL ENHCSNFVFT FNGVDTDGTV TKGGYSTHIV VHERYCYKIP DGYPLDKAAP LACAGITVYT PMIRHNMNQP GKSLGVIGLG
201: GLGHMAVKFG KAFGLNVTVL STSESKRDEA INLLGADNFV VSSDKNQMEF LKNSLDFIVD TASGDHPFDP YLALLKVRGT MALVGFPGEI RVHPATLNLG
301: ARTLSGSVVG GTKDTQEMIN FCAANRIYPN VEVIKIDYIN EALERLVNRD VKYRFVIDIE SSFK
001: MSSSESVENE CMCWAARDPS GLLSPHTITR RSVTTDDVSL TITHCGVCYA DVIWSRNQHG DSKYPLVPGH EIAGIVTKVG PNVQRFKVGD HVGVGTYVNS
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK
Arabidopsis Description
CAD1CAD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLT3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.