Factsheet for GSMUA_Achr1P00850_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P26450_001	Banana	cytosol	79.55	79.33
VIT_02s0025g03100.t01	Wine grape	cytosol	74.79	75.21
Zm00001d045043_P001	Maize	cytosol	73.11	73.73
EER88001	Sorghum	cytosol	72.83	73.45
TraesCS3B01G485000.1	Wheat	cytosol	72.27	72.88
OQU75993	Sorghum	cytosol	72.27	72.88
KRH10632	Soybean	cytosol	71.99	71.99
TraesCS3A01G448400.1	Wheat	cytosol	71.15	71.75
EER88002	Sorghum	cytosol	70.87	71.47
Os10t0194200-01	Rice	plasma membrane, plastid	70.87	71.47
KRH21722	Soybean	cytosol	71.43	71.43
TraesCS3A01G448800.1	Wheat	cytosol	71.15	71.35
HORVU3Hr1G097140.1	Barley	cytosol	71.15	71.35
Bra016041.1-P	Field mustard	cytosol	70.59	71.19
HORVU3Hr1G097160.1	Barley	cytosol	70.31	70.9
AT1G72680.1	Thale cress	cytosol	70.31	70.7
TraesCS3B01G484500.1	Wheat	cytosol	70.03	70.62
Os11t0622800-00	Rice	cytosol	70.03	70.62
OQU79199	Sorghum	cytosol	63.03	69.88
CDX72936	Canola	cytosol	68.07	69.23
TraesCS3D01G440900.1	Wheat	cytosol	70.59	69.23
VIT_02s0025g03110.t01	Wine grape	cytosol	14.57	67.53
CDY72501	Canola	cytosol	35.01	66.84
VIT_00s0174g00270.t01	Wine grape	cytosol	66.67	66.67
PGSC0003DMT400012845	Potato	cytosol	69.75	64.84
HORVU3Hr1G097060.1	Barley	cytosol, plastid	26.89	62.75
VIT_00s0174g00280.t01	Wine grape	extracellular	61.9	61.56
KXG19525	Sorghum	cytosol	71.43	61.0
Solyc08g048300.1.1	Tomato	cytosol	15.41	59.78
TraesCS3D01G441200.1	Wheat	extracellular, golgi	70.87	59.39
GSMUA_Achr7P07160_001	Banana	cytosol	52.66	52.51
GSMUA_Achr5P11490_001	Banana	cytosol	52.1	51.96
GSMUA_Achr9P27270_001	Banana	cytosol	50.14	50.42
GSMUA_AchrUn_...	Banana	cytosol	48.74	48.07
Solyc12g055820.1.1	Tomato	cytosol	69.75	47.25
GSMUA_Achr9P30860_001	Banana	cytosol	49.02	46.92
GSMUA_Achr10P...	Banana	cytosol	45.66	45.66
GSMUA_Achr4P12970_001	Banana	cytosol	44.54	44.54
OQU75994	Sorghum	cytosol	22.13	44.13
GSMUA_Achr4P06150_001	Banana	cytosol	42.02	42.02
Zm00001d002250_P001	Maize	plastid	70.59	8.04

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
InterPro:D-isomer_DH_CS1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G00850_001	EnsemblPlants:GSMUA_Achr1P00850_001
EnsemblPlants:GSMUA_Achr1T00850_001	InterPro:GroES-like_sf	UniProt:M0RVZ3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	ScanProsite:PS00065	PANTHER:PTHR42683	PANTHER:PTHR42683:SF17	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002964053	SEG:seg	:	:

Description

Probable cinnamyl alcohol dehydrogenase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G00850_001]

Coordinates

chr1:-:637701..642754

Molecular Weight (calculated)

38990.2 Da

IEP (calculated)

7.151

GRAVY (calculated)

0.012

Length

357 amino acids

Sequence
(BLAST)

001: MAAELGHGNC LSWAARNVTG TLSPYRFDRR SVGADDISLK IKYCGVCFAD VVWTRNKHGD SMYPLVPGHE IVGVVTATGS NVKGFKVGDH IGVGTYVNSC
101: RNCEYCDDFL EVFCSKGPTL TFNGLDSDGT VTKGGYSSFI VVHERQVYCY KIPDGYPLDK AAPLLCAGIT VYSPMMRHKM NQPGKSLGVI GLGGLGHMAV
201: MFGKAFGLKV TVFSTSESKK EEALNLLRAD NFVISSDKQQ MMSLMKSLDY IIDTASGDHP FDPYMSLLKV GGVLVLVGFP SEVRLLPISL NMGAKSVSGS
301: MTGGTKETQE MLNFCATNQI YPEVEVINIQ YINEALERLI KRDVKYRFVI DIANSLD

Best Arabidopsis Sequence Match ( AT1G72680.1 )
(BLAST)

001: MSSSESVENE CMCWAARDPS GLLSPHTITR RSVTTDDVSL TITHCGVCYA DVIWSRNQHG DSKYPLVPGH EIAGIVTKVG PNVQRFKVGD HVGVGTYVNS
101: CRECEYCNEG QEVNCAKGVF TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ PGKSLGVIGL GGLGHMAVKF
201: GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT
301: GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK

Arabidopsis Description

CAD1CAD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.