CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031216.1-P	Field mustard	cytosol	98.04	98.04
CDX76968	Canola	cytosol	97.21	97.21
AT2G21730.1	Thale cress	peroxisome	89.66	85.37
AT2G21890.1	Thale cress	cytosol	88.83	84.8
CDY56752	Canola	cytosol	82.96	82.5
CDX72704	Canola	cytosol	82.68	82.22
PGSC0003DMT400047475	Potato	cytosol	72.91	72.5
VIT_04s0044g00210.t01	Wine grape	cytosol	72.63	72.42
KRH59514	Soybean	cytosol	72.63	72.22
KRH43378	Soybean	cytosol	71.23	71.63
Solyc03g078430.1.1	Tomato	extracellular, plastid, vacuole	39.39	67.79
Solyc03g078440.2.1	Tomato	cytosol	72.91	66.75
CDY52519	Canola	cytosol	61.73	62.61
CDX90391	Canola	cytosol	61.73	62.61
EER98870	Sorghum	cytosol	16.2	59.18
CDX75688	Canola	cytosol	58.38	58.54
CDX69348	Canola	cytosol	57.54	57.7
CDX90392	Canola	cytosol	57.26	57.42
CDY52520	Canola	cytosol	41.9	57.03
CDX75687	Canola	cytosol	57.54	56.91
CDX69347	Canola	cytosol	57.54	56.91
CDY63551	Canola	cytosol	10.61	56.72
CDY46173	Canola	cytosol	48.04	47.12
CDX72936	Canola	cytosol	46.09	47.01
CDX72466	Canola	cytosol	46.65	46.78
CDX99222	Canola	cytosol	47.77	46.72
CDY49288	Canola	cytosol	46.37	46.5
CDX69037	Canola	cytosol	45.53	45.66
CDX75413	Canola	cytosol	45.53	45.66
CDY72501	Canola	cytosol	23.18	44.38

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	GO:A0A078FKW1	UniProt:A0A078FKW1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EnsemblPlants:CDY13791	ProteinID:CDY13791	ProteinID:CDY13791.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00078228001	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF12	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0004EE785B	SEG:seg	:	:

Description

BnaA09g42930DBnaA09g42930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKW1]

Coordinates

chrLK032038:-:401847..403828

Molecular Weight (calculated)

38796.7 Da

IEP (calculated)

6.983

GRAVY (calculated)

-0.056

Length

358 amino acids

Sequence
(BLAST)

001: MAKSSDQNKA FGWAANDKSG VLSPFHFSRR ENGDNDVTVK ILFCGVCHSD LHTIKNDWGF SHYPIIPGHE IVGIATKVGK NVTKFKEGDR VGVGVIIGSC
101: QSCESCNQDL ENYCPQLVYT YNSRSFDGTR NQGGYSDKIV VDQRFVLSFL DGLPSDSGAP LLCAGITVYS PMKYYGMTEE KGKHLGVSGL GGLGHIAVKI
201: GKAFGLKVTV ISRSSEKESE AIDRLGADSF LVTTDAQKMK DAIGTMDFVL DTVSAEHSLL PLFSLLKVNG KLVALGLPEK PLELPIFPLV LGRKMVGGSQ
301: IGGMKETQEM LDFCAKHSIV ADIELIKISD INSAMDRLAK SDVRYRFVID VANSINSA

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.