Factsheet for VIT_04s0044g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033613.1-P	Field mustard	cytosol	79.11	78.89
CDY56752	Canola	cytosol	79.11	78.89
CDX72704	Canola	cytosol	78.83	78.61
AT4G39330.1	Thale cress	cytosol	77.99	77.78
VIT_04s0044g00190.t01	Wine grape	cytosol	77.72	77.72
PGSC0003DMT400047475	Potato	cytosol	75.49	75.28
Bra031216.1-P	Field mustard	cytosol	73.26	73.46
CDX76968	Canola	cytosol	73.26	73.46
CDY13791	Canola	cytosol	72.42	72.63
Solyc03g078440.2.1	Tomato	cytosol	75.49	69.31
AT2G21730.1	Thale cress	peroxisome	71.59	68.35
AT2G21890.1	Thale cress	cytosol	70.75	67.73
VIT_00s0346g00080.t01	Wine grape	cytosol	68.25	67.68
VIT_00s0371g00100.t01	Wine grape	cytosol	68.25	67.68
VIT_00s0346g00110.t01	Wine grape	cytosol	65.74	65.56
VIT_00s0371g00050.t01	Wine grape	cytosol	65.74	65.56
Solyc03g078430.1.1	Tomato	extracellular, plastid, vacuole	37.88	65.38
VIT_00s0615g00010.t01	Wine grape	cytosol	64.9	64.72
VIT_00s1389g00010.t01	Wine grape	cytosol	64.62	64.44
VIT_00s0615g00020.t01	Wine grape	cytosol	64.35	64.17
VIT_00s0371g00020.t01	Wine grape	cytosol	9.75	63.64
VIT_00s0371g00010.t01	Wine grape	cytosol	12.26	62.86
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	64.9	61.97
VIT_00s0346g00100.t01	Wine grape	cytosol	61.84	61.5
VIT_00s0346g00120.t01	Wine grape	cytosol	61.84	61.5
EER98870	Sorghum	cytosol	16.71	61.22
VIT_00s0371g00060.t01	Wine grape	cytosol	50.7	60.67
VIT_00s0371g00040.t01	Wine grape	cytosol	37.88	60.44
VIT_00s0218g00010.t01	Wine grape	cytosol	61.0	59.67
VIT_10s0003g04910.t01	Wine grape	cytosol	59.61	58.95
VIT_00s0615g00030.t01	Wine grape	cytosol	65.18	58.79
VIT_18s0001g14910.t01	Wine grape	cytosol	58.22	58.06
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	50.97	54.14
VIT_03s0180g00260.t01	Wine grape	cytosol	52.37	52.66
VIT_02s0025g03100.t01	Wine grape	cytosol	50.14	50.7
VIT_03s0180g00250.t01	Wine grape	cytosol	50.14	50.42
VIT_07s0129g01030.t01	Wine grape	cytosol, mitochondrion	49.3	50.28
VIT_00s0174g00270.t01	Wine grape	cytosol	48.75	49.02
VIT_00s0371g00070.t01	Wine grape	cytosol	49.58	48.77
VIT_00s0174g00220.t01	Wine grape	golgi	24.51	48.09
VIT_02s0025g03110.t01	Wine grape	cytosol	10.31	48.05
VIT_00s0174g00210.t01	Wine grape	cytosol	16.71	45.11
VIT_18s0001g01160.t01	Wine grape	mitochondrion	18.66	41.61
VIT_00s0174g00280.t01	Wine grape	extracellular	41.5	41.5

Protein Annotations

EntrezGene:100250644	wikigene:100250644	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	ProteinID:CBI37635	ProteinID:CBI37635.3	UniProt:D7U459	EMBL:FN596506
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100250644	wikigene:LOC100250644
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683
PANTHER:PTHR42683:SF12	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001983227	ArrayExpress:VIT_04s0044g00210
EnsemblPlantsGene:VIT_04s0044g00210	EnsemblPlants:VIT_04s0044g00210.t01	unigene:Vvi.12612	RefSeq:XP_002279718	RefSeq:XP_002279718.1	SEG:seg

Description

No Description!

Coordinates

chr4:-:20897775..20900222

Molecular Weight (calculated)

39107.8 Da

IEP (calculated)

9.130

GRAVY (calculated)

-0.047

Length

359 amino acids

Sequence
(BLAST)

001: MAKSPQEEHP QKAFGWAARD PSGILSPFHF SRRENSPDDV TVRVLFCGVC HTDLHSIKND WGFTRYPIIP GHEFTGIVTK LGKNVKKFKL GDKVGVGVMV
101: GSCRSCESCK QGLENYCPKM MFAYNSIYHD GTKNYGGYSN MVVVDQHFVL RFPDNLPLAA GAPLLCAGIT VYSPMKYYGM TQAGKHLGVS GLGGLGHVAV
201: KIGKAFGHKV TIISASPNKK DDAIKRLGAD AFLLSTDPTK MKAALGTMDY IIDTVAAVHP LGPLLGLLKV NGKLITLGLP EKPLELPIFP LVLGRKLVGG
301: SNIGSTKETQ EMLEFCAKHN ITADIEMIRM DYINTAMERL AKSDVRYRFV IDVAGSLSE

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.