Factsheet for VIT_00s0371g00100.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0346g00080.t01	Wine grape	cytosol	98.62	98.62
VIT_00s0615g00020.t01	Wine grape	cytosol	80.66	81.11
VIT_00s0346g00110.t01	Wine grape	cytosol	80.11	80.56
VIT_00s0371g00050.t01	Wine grape	cytosol	80.11	80.56
VIT_00s0615g00010.t01	Wine grape	cytosol	79.56	80.0
VIT_00s1389g00010.t01	Wine grape	cytosol	79.28	79.72
VIT_00s0371g00010.t01	Wine grape	cytosol	15.19	78.57
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	80.39	77.39
VIT_00s0346g00100.t01	Wine grape	cytosol	76.24	76.45
VIT_00s0346g00120.t01	Wine grape	cytosol	75.97	76.18
VIT_00s0371g00060.t01	Wine grape	cytosol	62.43	75.33
VIT_00s0218g00010.t01	Wine grape	cytosol	75.97	74.93
VIT_00s0371g00040.t01	Wine grape	cytosol	46.41	74.67
VIT_00s0615g00030.t01	Wine grape	cytosol	80.11	72.86
VIT_04s0044g00190.t01	Wine grape	cytosol	69.89	70.47
VIT_00s0371g00020.t01	Wine grape	cytosol	10.5	69.09
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	64.09	68.64
VIT_04s0044g00210.t01	Wine grape	cytosol	67.68	68.25
AT4G37970.1	Thale cress	cytosol	67.4	67.22
TraesCS6B01G406000.1	Wheat	cytosol	67.68	66.94
TraesCS6A01G369800.1	Wheat	cytosol, golgi	67.13	66.58
CDX69347	Canola	cytosol	66.57	66.57
Zm00001d024314_P001	Maize	cytosol	66.02	66.57
TraesCS6B01G406300.1	Wheat	cytosol	66.57	66.03
TraesCS6D01G353700.1	Wheat	cytosol	66.57	65.85
Bra011798.1-P	Field mustard	cytosol	65.75	65.75
CDX75687	Canola	cytosol	65.75	65.75
TraesCS6D01G353300.1	Wheat	cytosol	66.02	65.48
TraesCS6A01G370100.1	Wheat	cytosol	63.81	64.89
TraesCS6D01G353400.1	Wheat	cytosol	65.75	64.67
TraesCS6B01G406200.1	Wheat	cytosol	65.19	64.48
TraesCS7A01G350500.1	Wheat	cytosol	66.02	64.42
OQU80077	Sorghum	cytosol	65.75	63.81
TraesCS7D01G376600.1	Wheat	cytosol	64.64	63.59
TraesCS7A01G380100.1	Wheat	cytosol	64.64	63.59
TraesCS7B01G282100.1	Wheat	cytosol	64.92	63.51
TraesCS7B01G232400.1	Wheat	cytosol, plastid	65.75	63.13
Os10t0430200-01	Rice	cytosol	63.54	62.84
VIT_10s0003g04910.t01	Wine grape	cytosol	62.98	62.81
Zm00001d020401_P001	Maize	cytosol	40.06	62.77
Zm00001d002346_P002	Maize	plastid	62.98	61.62
VIT_00s0371g00070.t01	Wine grape	cytosol	61.88	61.37
TraesCS5D01G210600.1	Wheat	cytosol	60.22	61.24
TraesCS5B01G202700.1	Wheat	cytosol	60.22	61.24
Os08t0270400-00	Rice	cytosol	51.38	61.18
TraesCS2D01G422400.1	Wheat	cytosol	62.15	61.14
TraesCS2B01G444200.2	Wheat	cytosol	61.88	60.7
TraesCS5A01G205700.1	Wheat	cytosol	59.67	60.67
TraesCS2A01G424600.1	Wheat	cytosol	61.6	60.43
EER96708	Sorghum	cytosol	59.94	60.28
TraesCS7D01G184600.1	Wheat	cytosol	33.43	59.9
OQU82308	Sorghum	cytosol	62.71	59.74
TraesCS7A01G183000.1	Wheat	cytosol	58.84	59.66
EER98869	Sorghum	cytosol	59.39	59.39
TraesCS7D01G184500.1	Wheat	cytosol	58.29	59.1
VIT_18s0001g14910.t01	Wine grape	cytosol	58.56	58.89
Os04t0612700-01	Rice	cytosol	61.6	58.84
Os09t0399800-01	Rice	cytosol	58.01	58.5
Zm00001d020400_P001	Maize	plastid	58.84	58.36
TraesCS7D01G328300.1	Wheat	cytosol	66.02	58.29
Os09t0400400-01	Rice	cytosol	58.01	58.01
Os09t0400300-01	Rice	plasma membrane	55.25	57.47
TraesCS5B01G209800.2	Wheat	plastid	61.05	56.81
TraesCS5A01G213900.1	Wheat	plastid	60.77	56.56
TraesCS5D01G218100.2	Wheat	plastid	60.22	56.19
VIT_03s0180g00260.t01	Wine grape	cytosol	54.42	55.18
TraesCS5B01G202800.1	Wheat	plastid	63.54	54.63
VIT_03s0180g00250.t01	Wine grape	cytosol	53.04	53.78
TraesCS5D01G210700.1	Wheat	plastid	62.43	53.68
Os03t0223200-00	Rice	cytosol	56.63	53.66
TraesCS5A01G205600.1	Wheat	plastid	62.43	53.55
VIT_02s0025g03100.t01	Wine grape	cytosol	52.21	53.24
VIT_00s0174g00270.t01	Wine grape	cytosol	52.21	52.94
VIT_07s0129g01030.t01	Wine grape	cytosol, mitochondrion	51.38	52.84
OQU89465	Sorghum	plastid	60.22	52.15
VIT_00s0174g00220.t01	Wine grape	golgi	26.24	51.91
VIT_02s0025g03110.t01	Wine grape	cytosol	10.5	49.35
Os09t0400000-00	Rice	plasma membrane	59.39	49.31
VIT_00s0174g00210.t01	Wine grape	cytosol	17.68	48.12
VIT_18s0001g01160.t01	Wine grape	mitochondrion	20.17	45.34
VIT_00s0174g00280.t01	Wine grape	extracellular	41.71	42.06
Zm00001d020402_P001	Maize	plastid	12.71	37.7

Protein Annotations

EntrezGene:100854646	wikigene:100854646	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	ProteinID:CBI33216	ProteinID:CBI33216.3	UniProt:D7TRU0	EMBL:FN596041
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100854646	wikigene:LOC100854646
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683
PANTHER:PTHR42683:SF26	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGR:TC54034	TIGR:TC58955
UniParc:UPI00015CD6AE	ArrayExpress:VIT_00s0371g00100	EnsemblPlantsGene:VIT_00s0371g00100	EnsemblPlants:VIT_00s0371g00100.t01	unigene:Vvi.70	unigene:Vvi.9138
RefSeq:XP_003635250	RefSeq:XP_003635250.1	RefSeq:XP_003635280	RefSeq:XP_003635280.1	SEG:seg	:

Description

No Description!

Coordinates

chrUn:-:26168810..26171260

Molecular Weight (calculated)

39004.3 Da

IEP (calculated)

6.981

GRAVY (calculated)

-0.022

Length

362 amino acids

Sequence
(BLAST)

001: MAKSPEEEHP VKAFGWAARD HSGHLSPFNF SRRATGEEDV RFKVLYCGIC HSDLHSIKNE WGNAAYPMVP GHEIVGVVTE VGSKVEKFKV GDKVGVGCLV
101: GACHSCESCS DDLENYCSKL ILTYNMPYHD GTRTYGGYSD TMVAPERYVV RIPDNMPLAA GAPLLCAGIT VYSPLKYFGF TQPGMHIGIV GLGGLGHVAA
201: KFAKAFGVKV TLISTSPSKK KEAIEHLGAD SFLVSRDPEQ MQAAMGTMDG ILDTVSATHP LLPLLGLLKN NGKLILLGVP EKPLELPAFS LIMGRKTVAG
301: SGIGGMKETQ EMLDFAAKHN VTADIEVVPM DYVNTAMERL AKADVRYRFV IDIGNSLSAT KP

Best Arabidopsis Sequence Match ( AT4G37970.1 )
(BLAST)

001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS

Arabidopsis Description

CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.