Factsheet for VIT_00s0371g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0346g00110.t01	Wine grape	cytosol	99.44	99.44
VIT_00s1389g00010.t01	Wine grape	cytosol	97.5	97.5
VIT_00s0615g00010.t01	Wine grape	cytosol	97.22	97.22
VIT_00s0615g00020.t01	Wine grape	cytosol	89.44	89.44
VIT_00s0371g00010.t01	Wine grape	cytosol	17.22	88.57
VIT_00s0346g00100.t01	Wine grape	cytosol	83.33	83.1
VIT_00s0218g00010.t01	Wine grape	cytosol	83.89	82.29
VIT_00s0346g00120.t01	Wine grape	cytosol	82.5	82.27
VIT_00s0615g00030.t01	Wine grape	cytosol	90.28	81.66
VIT_00s0371g00060.t01	Wine grape	cytosol	67.78	81.33
VIT_00s0371g00100.t01	Wine grape	cytosol	80.56	80.11
VIT_00s0371g00040.t01	Wine grape	cytosol	50.0	80.0
VIT_00s0346g00080.t01	Wine grape	cytosol	80.28	79.83
VIT_00s0371g00020.t01	Wine grape	cytosol	11.94	78.18
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	78.06	74.73
VIT_04s0044g00190.t01	Wine grape	cytosol	68.06	68.25
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	63.33	67.46
VIT_04s0044g00210.t01	Wine grape	cytosol	65.56	65.74
VIT_10s0003g04910.t01	Wine grape	cytosol	65.28	64.74
Zm00001d024314_P001	Maize	cytosol	63.89	64.07
TraesCS7D01G376600.1	Wheat	cytosol	64.72	63.32
TraesCS7A01G380100.1	Wheat	cytosol	64.72	63.32
TraesCS7B01G282100.1	Wheat	cytosol	65.0	63.24
TraesCS6A01G369800.1	Wheat	cytosol, golgi	63.89	63.01
TraesCS6B01G406000.1	Wheat	cytosol	63.89	62.84
TraesCS7A01G350500.1	Wheat	cytosol	64.72	62.8
TraesCS6B01G406300.1	Wheat	cytosol	63.61	62.74
TraesCS6D01G353700.1	Wheat	cytosol	63.61	62.57
TraesCS6D01G353300.1	Wheat	cytosol	63.33	62.47
TraesCS6A01G370100.1	Wheat	cytosol	61.67	62.36
TraesCS7B01G232400.1	Wheat	cytosol, plastid	65.28	62.33
TraesCS6D01G353400.1	Wheat	cytosol	63.33	61.96
VIT_00s0371g00070.t01	Wine grape	cytosol	62.78	61.92
TraesCS5D01G210600.1	Wheat	cytosol	61.11	61.8
TraesCS6B01G406200.1	Wheat	cytosol	62.22	61.2
OQU80077	Sorghum	cytosol	63.33	61.13
Os10t0430200-01	Rice	cytosol	61.94	60.93
TraesCS5B01G202700.1	Wheat	cytosol	59.72	60.39
Os09t0400400-01	Rice	cytosol	60.28	59.94
Os09t0399800-01	Rice	cytosol	59.72	59.89
TraesCS5A01G205700.1	Wheat	cytosol	59.17	59.83
Os09t0400300-01	Rice	plasma membrane	57.22	59.2
EER96708	Sorghum	cytosol	59.17	59.17
TraesCS2D01G422400.1	Wheat	cytosol	60.28	58.97
Zm00001d020401_P001	Maize	cytosol	37.78	58.87
Os08t0270400-00	Rice	cytosol	49.44	58.55
TraesCS7D01G184600.1	Wheat	cytosol	32.78	58.42
TraesCS2A01G424600.1	Wheat	cytosol	59.72	58.27
TraesCS2B01G444200.2	Wheat	cytosol	59.72	58.27
TraesCS7D01G184500.1	Wheat	cytosol	57.78	58.26
TraesCS5B01G209800.2	Wheat	plastid	62.5	57.84
Zm00001d002346_P002	Maize	plastid	59.44	57.84
VIT_18s0001g14910.t01	Wine grape	cytosol	57.78	57.78
EER98869	Sorghum	cytosol	58.06	57.73
TraesCS7A01G183000.1	Wheat	cytosol	57.22	57.7
TraesCS5A01G213900.1	Wheat	plastid	62.22	57.58
Os04t0612700-01	Rice	cytosol	60.28	57.26
TraesCS5D01G218100.2	Wheat	plastid	61.67	57.22
TraesCS7D01G328300.1	Wheat	cytosol	65.0	57.07
Zm00001d020400_P001	Maize	plastid	57.5	56.71
OQU82308	Sorghum	cytosol	58.89	55.79
TraesCS5B01G202800.1	Wheat	plastid	63.61	54.39
Os03t0223200-00	Rice	cytosol	57.5	54.19
OQU89465	Sorghum	plastid	62.78	54.07
TraesCS5D01G210700.1	Wheat	plastid	62.5	53.44
TraesCS5A01G205600.1	Wheat	plastid	62.5	53.32
VIT_03s0180g00260.t01	Wine grape	cytosol	52.78	53.22
VIT_02s0025g03100.t01	Wine grape	cytosol	52.22	52.96
VIT_00s0174g00270.t01	Wine grape	cytosol	51.39	51.82
Os09t0400000-00	Rice	plasma membrane	62.5	51.61
VIT_03s0180g00250.t01	Wine grape	cytosol	50.56	50.98
VIT_00s0174g00220.t01	Wine grape	golgi	25.83	50.82
VIT_07s0129g01030.t01	Wine grape	cytosol, mitochondrion	48.89	50.0
VIT_02s0025g03110.t01	Wine grape	cytosol	10.28	48.05
VIT_00s0174g00210.t01	Wine grape	cytosol	17.5	47.37
VIT_18s0001g01160.t01	Wine grape	mitochondrion	20.56	45.96
VIT_00s0174g00280.t01	Wine grape	extracellular	43.33	43.45
Zm00001d020402_P001	Maize	plastid	11.94	35.25

Protein Annotations

EntrezGene:100854583	wikigene:100854583	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	ProteinID:CBI33212	ProteinID:CBI33212.3	UniProt:D7TRT6	EMBL:FN596041
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100854583	wikigene:LOC100854583
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683
PANTHER:PTHR42683:SF23	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGR:TC52904	TIGR:TC55466
UniParc:UPI0001BE3DB9	ArrayExpress:VIT_00s0371g00050	EnsemblPlantsGene:VIT_00s0371g00050	EnsemblPlants:VIT_00s0371g00050.t01	unigene:Vvi.12130	unigene:Vvi.3203
RefSeq:XP_002268243	RefSeq:XP_002268243.1	RefSeq:XP_002272479	RefSeq:XP_002272479.1	RefSeq:XP_003635278	RefSeq:XP_003635278.1
RefSeq:XP_003635434	RefSeq:XP_003635434.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrUn:-:26141107..26143435

Molecular Weight (calculated)

38805.2 Da

IEP (calculated)

6.935

GRAVY (calculated)

0.020

Length

360 amino acids

Sequence
(BLAST)

001: MAKSAEQEHP TKAFGWAATD TSGVLSPFKF SRRETGEKDV RFKVLYCGIC HSDLHMAKND WGTSTYPIVP GHEIVGIVTE VGSKVGKFKV GDRVGVGCMV
101: GACHSCDSCD NDLENYCPKM VFTYSAPYHD GTTTYGGYSD VMVAEERYVV RIPDNLPLDA GAPLLCAGIT VYSPLQHFGL TKPGMHIGVV GLGGLGHVAV
201: KFAKGFGVKV TVISTSPSKK KEAIEHLGAD YFLVSREPDQ MQAAMGTMDG IIDTVSAVHP LLPLIGLLKS QGKLVMVGAP NRPLELPVFP LIMGRKVVAG
301: SCIGGMKETQ EMIDFAGKHN ITADVEVIPM DYVNTAMERL EKADVRYRFV IDIGNTLKSA

Best Arabidopsis Sequence Match ( AT4G37990.1 )
(BLAST)

001: MGKVLQKEAF GLAAKDNSGV LSPFSFTRRE TGEKDVRFKV LFCGICHSDL HMVKNEWGMS TYPLVPGHEI VGVVTEVGAK VTKFKTGEKV GVGCLVSSCG
101: SCDSCTEGME NYCPKSIQTY GFPYYDNTIT YGGYSDHMVC EEGFVIRIPD NLPLDAAAPL LCAGITVYSP MKYHGLDKPG MHIGVVGLGG LGHVGVKFAK
201: AMGTKVTVIS TSEKKRDEAI NRLGADAFLV SRDPKQIKDA MGTMDGIIDT VSATHSLLPL LGLLKHKGKL VMVGAPEKPL ELPVMPLIFE RKMVMGSMIG
301: GIKETQEMID MAGKHNITAD IELISADYVN TAMERLEKAD VRYRFVIDVA NTLKPNPNL

Arabidopsis Description

CAD8Cinnamyl alcohol dehydrogenase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q02972]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.