Factsheet for VIT_18s0122g00450.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0371g00020.t01	Wine grape	cytosol	11.97	81.82
VIT_00s0371g00100.t01	Wine grape	cytosol	77.39	80.39
VIT_00s0346g00080.t01	Wine grape	cytosol	76.86	79.83
VIT_00s0346g00110.t01	Wine grape	cytosol	74.73	78.06
VIT_00s0371g00050.t01	Wine grape	cytosol	74.73	78.06
VIT_00s0615g00020.t01	Wine grape	cytosol	74.47	77.78
VIT_00s0615g00010.t01	Wine grape	cytosol	74.47	77.78
VIT_00s1389g00010.t01	Wine grape	cytosol	74.2	77.5
VIT_00s0346g00100.t01	Wine grape	cytosol	72.07	75.07
VIT_00s0371g00060.t01	Wine grape	cytosol	59.57	74.67
VIT_00s0346g00120.t01	Wine grape	cytosol	71.54	74.52
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	65.96	73.37
VIT_00s0371g00040.t01	Wine grape	cytosol	43.35	72.44
VIT_00s0218g00010.t01	Wine grape	cytosol	69.95	71.66
VIT_00s0371g00010.t01	Wine grape	cytosol	13.3	71.43
VIT_00s0615g00030.t01	Wine grape	cytosol	75.0	70.85
VIT_04s0044g00190.t01	Wine grape	cytosol	65.16	68.25
AT4G37970.1	Thale cress	cytosol	64.63	66.94
CDX69347	Canola	cytosol	64.36	66.85
VIT_00s0371g00070.t01	Wine grape	cytosol	64.1	66.03
Bra011798.1-P	Field mustard	cytosol	63.03	65.47
CDX75687	Canola	cytosol	63.03	65.47
VIT_04s0044g00210.t01	Wine grape	cytosol	61.97	64.9
VIT_10s0003g04910.t01	Wine grape	cytosol	60.11	62.26
TraesCS6B01G406000.1	Wheat	cytosol	60.37	62.02
Zm00001d024314_P001	Maize	cytosol	59.04	61.84
TraesCS6A01G369800.1	Wheat	cytosol, golgi	59.84	61.64
TraesCS6B01G406300.1	Wheat	cytosol	59.57	61.37
TraesCS6D01G353300.1	Wheat	cytosol	59.31	61.1
TraesCS5D01G210600.1	Wheat	cytosol	57.45	60.67
TraesCS6D01G353700.1	Wheat	cytosol	59.04	60.66
TraesCS7D01G376600.1	Wheat	cytosol	59.04	60.33
TraesCS7B01G282100.1	Wheat	cytosol	59.31	60.27
TraesCS6A01G370100.1	Wheat	cytosol	56.91	60.11
TraesCS7A01G380100.1	Wheat	cytosol	58.78	60.05
TraesCS7A01G350500.1	Wheat	cytosol	59.04	59.84
TraesCS5A01G205700.1	Wheat	cytosol	56.65	59.83
TraesCS6D01G353400.1	Wheat	cytosol	58.51	59.78
TraesCS6B01G406200.1	Wheat	cytosol	57.98	59.56
Os08t0270400-00	Rice	cytosol	48.14	59.54
Zm00001d002346_P002	Maize	plastid	58.51	59.46
EER96708	Sorghum	cytosol	56.91	59.44
TraesCS7B01G232400.1	Wheat	cytosol, plastid	59.57	59.42
TraesCS7D01G184600.1	Wheat	cytosol	31.91	59.41
TraesCS5B01G202700.1	Wheat	cytosol	56.12	59.27
OQU80077	Sorghum	cytosol	58.51	58.98
Os09t0399800-01	Rice	cytosol	56.12	58.77
Os10t0430200-01	Rice	cytosol	57.18	58.74
EER98869	Sorghum	cytosol	55.85	58.01
Os09t0400400-01	Rice	cytosol	55.85	58.01
TraesCS2D01G422400.1	Wheat	cytosol	56.38	57.61
Zm00001d020401_P001	Maize	cytosol	35.37	57.58
OQU82308	Sorghum	cytosol	57.71	57.11
TraesCS2A01G424600.1	Wheat	cytosol	55.85	56.91
Os09t0400300-01	Rice	plasma membrane	52.66	56.9
TraesCS7D01G184500.1	Wheat	cytosol	53.99	56.86
TraesCS7A01G183000.1	Wheat	cytosol	53.99	56.86
Zm00001d020400_P001	Maize	plastid	55.05	56.71
TraesCS2B01G444200.2	Wheat	cytosol	55.32	56.37
Os04t0612700-01	Rice	cytosol	55.59	55.15
TraesCS5B01G209800.2	Wheat	plastid	56.91	55.01
VIT_18s0001g14910.t01	Wine grape	cytosol	52.66	55.0
TraesCS5D01G218100.2	Wheat	plastid	56.38	54.64
TraesCS5A01G213900.1	Wheat	plastid	56.38	54.5
TraesCS7D01G328300.1	Wheat	cytosol	59.31	54.39
VIT_03s0180g00260.t01	Wine grape	cytosol	50.53	53.22
Os03t0223200-00	Rice	cytosol	53.19	52.36
VIT_00s0174g00220.t01	Wine grape	golgi	25.27	51.91
VIT_02s0025g03100.t01	Wine grape	cytosol	48.94	51.83
VIT_03s0180g00250.t01	Wine grape	cytosol	49.2	51.82
TraesCS5B01G202800.1	Wheat	plastid	57.71	51.54
TraesCS5D01G210700.1	Wheat	plastid	57.45	51.31
VIT_00s0174g00270.t01	Wine grape	cytosol	48.4	50.98
OQU89465	Sorghum	plastid	56.65	50.96
TraesCS5A01G205600.1	Wheat	plastid	57.18	50.95
VIT_07s0129g01030.t01	Wine grape	cytosol, mitochondrion	47.07	50.28
VIT_02s0025g03110.t01	Wine grape	cytosol	10.11	49.35
Os09t0400000-00	Rice	plasma membrane	57.18	49.31
VIT_18s0001g01160.t01	Wine grape	mitochondrion	20.21	47.2
VIT_00s0174g00210.t01	Wine grape	cytosol	16.22	45.86
VIT_00s0174g00280.t01	Wine grape	extracellular	41.49	43.45
Zm00001d020402_P001	Maize	plastid	11.7	36.07

Protein Annotations

EntrezGene:100261642	wikigene:100261642	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	ProteinID:CBI40784	ProteinID:CBI40784.3	UniProt:D7UDG9	EMBL:FN596759
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100261642	wikigene:LOC100261642
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683
PANTHER:PTHR42683:SF26	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI00019851D7	ArrayExpress:VIT_18s0122g00450
EnsemblPlantsGene:VIT_18s0122g00450	EnsemblPlants:VIT_18s0122g00450.t01	unigene:Vvi.23399	RefSeq:XP_002276703	RefSeq:XP_002276703.1	SEG:seg

Description

No Description!

Coordinates

chr18:+:393158..395443

Molecular Weight (calculated)

40450.8 Da

IEP (calculated)

6.622

GRAVY (calculated)

-0.062

Length

376 amino acids

Sequence
(BLAST)

001: MASTNASVVF SGSKAVTSHE EEHPVKAFGW AARDNSGHLS PFNFSRRSTG EEDVRLKVLY CGICHTDLHN SKNEWGSASY PLVPGHEVVG TVTEVGSKVK
101: KFKVGDKVGV GSLVGACHSC DDCSHDLENY CPKLILTYGS LYHDGTMTYG GYSDTMVANE RYVIRIPDNM PLDKGAPLLC AGITVYSPLK YYGLNEPGMH
201: IGIVGLGGLG HIAVKFAKAF GCKVTVISTS PAKKKEAIEH LGADMFLVSR DEQQMQGAMG TMDGIIDTVS AIHPLLPLID LLKSQGKLVM LGAPDQPLEL
301: PAFPLILGRK SVGGSLTGGL KETQEMIDFA AKHDIKSDIE VISMDYINTA MERLAKGDVR YRFVIDIGNT LAASNP

Best Arabidopsis Sequence Match ( AT4G37970.1 )
(BLAST)

001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS

Arabidopsis Description

CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.