CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0400300-01	Rice	plasma membrane	63.64	76.44
EER96708	Sorghum	cytosol	64.59	75.0
EER98869	Sorghum	cytosol	63.16	72.93
TraesCS5A01G205600.1	Wheat	plastid	72.49	71.8
TraesCS5D01G210700.1	Wheat	plastid	72.25	71.73
TraesCS5B01G202800.1	Wheat	plastid	72.25	71.73
HORVU0Hr1G012860.2	Barley	plastid	72.01	71.5
EER98870	Sorghum	cytosol	16.75	71.43
Os09t0400000-00	Rice	plasma membrane	73.21	70.18
GSMUA_Achr9P27270_001	Banana	cytosol	59.57	70.14
VIT_00s0371g00050.t01	Wine grape	cytosol	54.07	62.78
VIT_00s0346g00110.t01	Wine grape	cytosol	54.07	62.78
VIT_00s0615g00010.t01	Wine grape	cytosol	53.83	62.5
VIT_00s1389g00010.t01	Wine grape	cytosol	53.59	62.22
Solyc11g011330.1.1	Tomato	cytosol	52.15	61.24
PGSC0003DMT400040520	Potato	cytosol	44.74	60.91
CDY52519	Canola	cytosol	51.44	60.91
Bra011799.1-P	Field mustard	cytosol	51.91	60.78
VIT_00s0615g00020.t01	Wine grape	cytosol	52.15	60.56
AT4G37980.1	Thale cress	cytosol	51.67	60.5
CDX75688	Canola	cytosol	51.67	60.5
CDX69348	Canola	cytosol	51.67	60.5
CDX90391	Canola	cytosol	50.96	60.34
Bra010625.1-P	Field mustard	cytosol	37.08	60.31
VIT_00s0371g00100.t01	Wine grape	cytosol	52.15	60.22
Solyc11g011340.1.1	Tomato	cytosol	51.67	60.17
CDY52520	Canola	cytosol	37.8	60.08
VIT_00s0346g00080.t01	Wine grape	cytosol	51.91	59.94
Bra010626.1-P	Field mustard	cytosol	49.52	59.83
CDX90392	Canola	cytosol	50.96	59.66
AT4G37990.1	Thale cress	cytosol	51.2	59.61
KRH74457	Soybean	cytosol	51.2	59.61
Bra010627.1-P	Field mustard	cytosol	47.85	59.35
PGSC0003DMT400040518	Potato	cytosol	50.48	59.27
VIT_00s0346g00100.t01	Wine grape	cytosol	50.96	59.0
VIT_00s0371g00060.t01	Wine grape	cytosol	42.11	58.67
VIT_00s0371g00010.t01	Wine grape	cytosol	9.81	58.57
PGSC0003DMT400080827	Potato	cytosol	29.67	58.49
VIT_00s0346g00120.t01	Wine grape	cytosol	50.48	58.45
PGSC0003DMT400013704	Potato	cytosol	49.76	58.43
VIT_00s0371g00040.t01	Wine grape	cytosol	31.34	58.22
Solyc11g010980.1.1	Tomato	cytosol	50.0	58.22
PGSC0003DMT400041578	Potato	cytosol	50.24	58.17
PGSC0003DMT400041563	Potato	cytosol	34.45	58.06
KRH74456	Soybean	cytosol	50.0	57.73
OQU80077	Sorghum	cytosol	51.44	57.64
Solyc11g010990.1.1	Tomato	cytosol	49.28	57.38
KRH39488	Soybean	cytosol	49.52	56.87
PGSC0003DMT400041573	Potato	cytosol	43.54	56.7
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	50.96	56.65
KRG99878	Soybean	cytosol	48.33	55.96
VIT_10s0003g04910.t01	Wine grape	cytosol	48.56	55.92
VIT_00s0218g00010.t01	Wine grape	cytosol	49.04	55.86
PGSC0003DMT400041566	Potato	cytosol	47.85	55.71
Solyc11g010960.1.1	Tomato	cytosol	47.85	55.71
VIT_00s0615g00030.t01	Wine grape	cytosol	52.15	54.77
CDX69347	Canola	cytosol	47.37	54.7
KRH07586	Soybean	cytosol	37.8	54.67
VIT_00s0371g00020.t01	Wine grape	cytosol	7.18	54.55
KRH45510	Soybean	cytosol	38.28	54.05
OQU82308	Sorghum	cytosol	49.04	53.95
CDX75687	Canola	cytosol	46.65	53.87
Bra011798.1-P	Field mustard	cytosol	46.65	53.87
PGSC0003DMT400024954	Potato	cytosol	34.21	53.36
PGSC0003DMT400024956	Potato	cytosol	15.31	53.33
AT4G37970.1	Thale cress	cytosol	46.17	53.17
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	20.57	53.09
EES10404	Sorghum	cytosol	45.69	52.76
PGSC0003DMT400043757	Potato	cytosol	14.59	52.59
EER88001	Sorghum	cytosol	44.26	52.26
OQU75993	Sorghum	cytosol	44.02	51.98
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	41.63	51.48
EER88002	Sorghum	cytosol	43.54	51.41
KRH39487	Soybean	cytosol	38.04	51.29
CDY63551	Canola	cytosol	8.13	50.75
KRH49728	Soybean	cytosol	26.08	49.77
KXG29649	Sorghum	cytosol	42.11	48.22
KRH45566	Soybean	cytosol	35.17	48.2
KRH45514	Soybean	cytosol	30.14	47.91
OQU79199	Sorghum	cytosol	36.84	47.83
PGSC0003DMT400041571	Potato	cytosol	15.79	47.48
VIT_00s0371g00070.t01	Wine grape	cytosol	40.19	46.03
Solyc05g024320.1.1	Tomato	cytosol	22.73	44.81
KXG19525	Sorghum	cytosol	43.78	43.78
VIT_18s0001g01160.t01	Wine grape	mitochondrion	14.59	37.89
OQU75994	Sorghum	cytosol	14.83	34.64
PGSC0003DMT400043759	Potato	cytosol	6.7	31.46

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	EntrezGene:8055798	UniProt:A0A1W0W560	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	EnsemblPlants:OQU89465	ProteinID:OQU89465	ProteinID:OQU89465.1	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF15	SMART:SM00829	EnsemblPlantsGene:SORBI_3002G195700
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001A83F5D	RefSeq:XP_002462350.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:58408619..58410895

Molecular Weight (calculated)

43776.9 Da

IEP (calculated)

7.770

GRAVY (calculated)

0.063

Length

418 amino acids

Sequence
(BLAST)

001: MSYHCRALVQ GPFLHPPFSP GAAGAPAPSL GVRVGLPSRA LRLPRPARAS VEKREQQVTM EEKAGQAAFG WAARDATGVL SPYNFSRRVP KDDDVTIKVL
101: YCGICHTDLH IIKNDWGNAM YPVVPGHEIV GVVTGVGGGV TRFKAGDTVG VGYFVGSCRS CDSCGKGNEN YCAGVVQTSN GVDYAHGGVP TKGGFSDVIV
201: VNEHYVVRVP DGLALDRTAP LLCAGVTVYS PMMRHGLNEP GKHLGVVGLG GLGHVAVKFG KAFGMKVTVI STSASKRQEA IESLGADEFL ISRDPEEMKA
301: ATGTMDGIID TVSAWHPITP LLALLKPLGQ MVVVGGPSKP LELPAYAIVP GGKGVAGNSV GSVGDCQAML EFAGKHGIGA EVEVIKMDYV NTAIERLEKN
401: DVRYRFVIDV AGSLGSAA

Best Arabidopsis Sequence Match ( AT2G21730.1 )
(BLAST)

001: MVDQNKAFGW AANDESGVLS PFHFSRRENG ENDVTVKILF CGVCHSDLHT IKNHWGFSRY PIIPGHEIVG IATKVGKNVT KFKEGDRVGV GVIIGSCQSC
101: ESCNQDLENY CPKVVFTYNS RSSDGTSRNQ GGYSDVIVVD HRFVLSIPDG LPSDSGAPLL CAGITVYSPM KYYGMTKESG KRLGVNGLGG LGHIAVKIGK
201: AFGLRVTVIS RSSEKEREAI DRLGADSFLV TTDSQKMKEA VGTMDFIIDT VSAEHALLPL FSLLKVNGKL VALGLPEKPL DLPIFSLVLG RKMVGGSQIG
301: GMKETQEMLE FCAKHKIVSD IELIKMSDIN SAMDRLAKSD VRYRFVIDVA NSLLPESSAE ILTEQVDHGV SITSRF

Arabidopsis Description

CAD2Cinnamyl alcohol dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.