Factsheet for PGSC0003DMT400041578

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040518	Potato	cytosol	73.13	74.16
PGSC0003DMT400040520	Potato	cytosol	62.05	72.96
PGSC0003DMT400013704	Potato	cytosol	71.75	72.75
PGSC0003DMT400080827	Potato	cytosol	42.66	72.64
PGSC0003DMT400041566	Potato	cytosol	70.08	70.47
PGSC0003DMT400041563	Potato	cytosol	47.92	69.76
PGSC0003DMT400041573	Potato	cytosol	61.5	69.16
PGSC0003DMT400043757	Potato	cytosol	21.88	68.1
PGSC0003DMT400024956	Potato	cytosol	21.88	65.83
PGSC0003DMT400047475	Potato	cytosol	64.27	64.44
PGSC0003DMT400024954	Potato	cytosol	46.81	63.06
Zm00001d024314_P001	Maize	cytosol	60.66	61.0
TraesCS6A01G369800.1	Wheat	cytosol, golgi	61.22	60.55
TraesCS6B01G406300.1	Wheat	cytosol	60.94	60.27
TraesCS6D01G353300.1	Wheat	cytosol	60.94	60.27
TraesCS6D01G353700.1	Wheat	cytosol	60.94	60.11
TraesCS6B01G406000.1	Wheat	cytosol	60.94	60.11
TraesCS7A01G350500.1	Wheat	cytosol	61.22	59.57
Os10t0430200-01	Rice	cytosol	60.11	59.29
TraesCS6B01G406200.1	Wheat	cytosol	59.83	59.02
TraesCS6A01G370100.1	Wheat	cytosol	58.17	58.99
TraesCS6D01G353400.1	Wheat	cytosol	60.11	58.97
TraesCS7B01G232400.1	Wheat	cytosol, plastid	61.22	58.62
OQU80077	Sorghum	cytosol	60.39	58.45
TraesCS7D01G376600.1	Wheat	cytosol	59.28	58.15
TraesCS7A01G380100.1	Wheat	cytosol	59.28	58.15
TraesCS7B01G282100.1	Wheat	cytosol	59.56	58.11
Zm00001d020401_P001	Maize	cytosol	36.57	57.14
TraesCS5D01G210600.1	Wheat	cytosol	56.23	57.02
TraesCS5B01G202700.1	Wheat	cytosol	56.23	57.02
TraesCS5A01G205700.1	Wheat	cytosol	55.96	56.74
Os09t0400300-01	Rice	plasma membrane	54.57	56.61
TraesCS7D01G184600.1	Wheat	cytosol	31.58	56.44
Os08t0270400-00	Rice	cytosol	47.37	56.25
TraesCS2D01G422400.1	Wheat	cytosol	56.79	55.71
TraesCS2A01G424600.1	Wheat	cytosol	56.51	55.28
EER96708	Sorghum	cytosol	55.12	55.28
TraesCS2B01G444200.2	Wheat	cytosol	56.23	55.01
EER98869	Sorghum	cytosol	55.12	54.97
TraesCS7A01G183000.1	Wheat	cytosol	54.29	54.9
Zm00001d002346_P002	Maize	plastid	56.23	54.86
TraesCS7D01G184500.1	Wheat	cytosol	53.74	54.34
Zm00001d020400_P001	Maize	plastid	54.85	54.25
TraesCS7D01G328300.1	Wheat	cytosol	61.5	54.15
Os09t0400400-01	Rice	cytosol	54.29	54.14
Os09t0399800-01	Rice	cytosol	53.74	54.04
OQU82308	Sorghum	cytosol	56.79	53.95
PGSC0003DMT400054502	Potato	peroxisome	53.74	53.89
Os04t0612700-01	Rice	cytosol	56.51	53.83
TraesCS5B01G209800.2	Wheat	plastid	57.89	53.73
TraesCS5A01G213900.1	Wheat	plastid	57.62	53.47
PGSC0003DMT400033637	Potato	peroxisome	53.19	53.33
TraesCS5D01G218100.2	Wheat	plastid	57.06	53.09
PGSC0003DMT400066217	Potato	cytosol	52.35	52.94
PGSC0003DMT400041571	Potato	cytosol	20.22	52.52
Os03t0223200-00	Rice	cytosol	55.4	52.36
TraesCS5B01G202800.1	Wheat	plastid	60.39	51.78
TraesCS5D01G210700.1	Wheat	plastid	60.11	51.54
TraesCS5A01G205600.1	Wheat	plastid	60.11	51.42
OQU89465	Sorghum	plastid	58.17	50.24
PGSC0003DMT400059621	Potato	cytosol	47.92	47.79
Os09t0400000-00	Rice	plasma membrane	57.62	47.71
PGSC0003DMT400012845	Potato	cytosol	50.42	47.4
PGSC0003DMT400043759	Potato	cytosol	9.7	39.33
Zm00001d020402_P001	Maize	plastid	11.08	32.79

Protein Annotations

EntrezGene:102595669	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1BBJ6
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400016115	PGSC:PGSC0003DMG400016115	EnsemblPlants:PGSC0003DMT400041578
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF26	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI0002957A5B	RefSeq:XP_006353145.1	SEG:seg	:	:

Description

Cinnamyl alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400016115]

Coordinates

chr11:+:2033166..2038715

Molecular Weight (calculated)

38821.3 Da

IEP (calculated)

6.840

GRAVY (calculated)

0.027

Length

361 amino acids

Sequence
(BLAST)

001: MEKSPEEVHP VKVFGWAATD TSGTLSPFKF SRRATGDKDV KLKILYCGIC HTDLHQLKNE WGFSKYPMVP GHEIVGEVTE VGSKVEKFKL GDKAGVGCLV
101: GSCRSCENCN NDIENYCSKG IATYSAMYHD GTPTYGGYSD IIIVDEHFVV RVPENMPLAA AAPLLCAGIT TYSPLRYFGL DKPGLHVGVV GLGGLGHVGV
201: KFAKALGVKV TVISTSQSKQ KEAIERLGAD SFLISSDPDQ LQAAMGTMDG ILDTVAATHP VLPLIGLLKT NGKLIMLGGV TKPLDLPVFP LLMGRKLVAG
301: SGIGGMKETQ EMIDFAAKHN ITADIEVIPM DYVNTAMERL AKADVKYRFV IDVAKTLKPD E

Best Arabidopsis Sequence Match ( AT4G37970.1 )
(BLAST)

001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS

Arabidopsis Description

CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.