Factsheet for Os04t0612700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G424600.1	Wheat	cytosol	75.99	78.05
TraesCS2D01G422400.1	Wheat	cytosol	75.2	77.45
TraesCS2B01G444200.2	Wheat	cytosol	75.2	77.24
Zm00001d002346_P002	Maize	plastid	72.3	74.05
OQU82308	Sorghum	cytosol	70.45	70.26
Os10t0430200-01	Rice	cytosol	67.81	70.22
Os08t0270400-00	Rice	cytosol	55.15	68.75
VIT_00s0371g00100.t01	Wine grape	cytosol	58.84	61.6
VIT_00s0346g00080.t01	Wine grape	cytosol	58.84	61.6
CDY52519	Canola	cytosol	56.2	60.34
VIT_00s0371g00050.t01	Wine grape	cytosol	57.26	60.28
KRH74457	Soybean	cytosol	56.99	60.17
CDX90391	Canola	cytosol	55.94	60.06
VIT_00s0346g00110.t01	Wine grape	cytosol	56.99	60.0
Bra010627.1-P	Field mustard	cytosol	53.03	59.64
Os09t0400300-01	Rice	plasma membrane	54.62	59.48
VIT_00s0615g00010.t01	Wine grape	cytosol	56.2	59.17
VIT_00s1389g00010.t01	Wine grape	cytosol	56.2	59.17
CDY52520	Canola	cytosol	40.9	58.94
AT4G37990.1	Thale cress	cytosol	55.67	58.77
Bra010626.1-P	Field mustard	cytosol	53.3	58.38
VIT_00s0615g00020.t01	Wine grape	cytosol	55.41	58.33
KRH74456	Soybean	cytosol	55.67	58.29
CDX90392	Canola	cytosol	54.88	58.26
AT4G37980.1	Thale cress	cytosol	54.62	57.98
Os09t0399800-01	Rice	cytosol	54.88	57.94
VIT_00s0371g00040.t01	Wine grape	cytosol	34.3	57.78
Bra011799.1-P	Field mustard	cytosol	54.35	57.7
PGSC0003DMT400040520	Potato	cytosol	46.7	57.65
KRG99878	Soybean	cytosol	54.88	57.62
AT4G37970.1	Thale cress	cytosol	55.15	57.58
Os09t0400400-01	Rice	cytosol	54.88	57.46
CDX69348	Canola	cytosol	54.09	57.42
VIT_00s0346g00100.t01	Wine grape	cytosol	54.62	57.34
VIT_00s0346g00120.t01	Wine grape	cytosol	54.62	57.34
Bra010625.1-P	Field mustard	cytosol	38.79	57.2
CDX75688	Canola	cytosol	53.83	57.14
VIT_00s0371g00010.t01	Wine grape	cytosol	10.55	57.14
KRH45510	Soybean	cytosol	44.59	57.09
PGSC0003DMT400080827	Potato	cytosol	31.93	57.08
Solyc11g011330.1.1	Tomato	cytosol	53.56	57.02
Solyc11g011340.1.1	Tomato	cytosol	53.83	56.82
CDX69347	Canola	cytosol	54.09	56.63
PGSC0003DMT400041578	Potato	cytosol	53.83	56.51
Bra011798.1-P	Field mustard	cytosol	53.83	56.35
CDX75687	Canola	cytosol	53.83	56.35
VIT_00s0371g00060.t01	Wine grape	cytosol	44.59	56.33
VIT_18s0122g00450.t01	Wine grape	cytosol, plastid	55.15	55.59
KRH07586	Soybean	cytosol	42.22	55.36
PGSC0003DMT400040518	Potato	cytosol	51.98	55.34
PGSC0003DMT400041563	Potato	cytosol	36.15	55.24
PGSC0003DMT400041566	Potato	cytosol	51.98	54.87
Os03t0223200-00	Rice	cytosol	55.15	54.71
Solyc11g010960.1.1	Tomato	cytosol	51.72	54.6
Solyc11g010980.1.1	Tomato	cytosol	51.72	54.6
Solyc11g010990.1.1	Tomato	cytosol	51.45	54.32
VIT_00s0615g00030.t01	Wine grape	cytosol	56.99	54.27
Os04t0229100-01	Rice	cytosol	51.45	54.17
PGSC0003DMT400013704	Potato	cytosol	50.66	53.93
PGSC0003DMT400043757	Potato	cytosol	16.36	53.45
VIT_00s0218g00010.t01	Wine grape	cytosol	51.45	53.13
KRH39487	Soybean	cytosol	43.27	52.9
KRH39488	Soybean	cytosol	50.66	52.75
PGSC0003DMT400041573	Potato	cytosol	44.06	52.02
VIT_10s0003g04910.t01	Wine grape	cytosol	49.6	51.79
KRH45514	Soybean	cytosol	35.88	51.71
PGSC0003DMT400024954	Potato	cytosol	35.62	50.37
VIT_00s0346g00090.t01	Wine grape	cytosol, peroxisome, plastid	44.85	50.3
Solyc04g048960.1.1	Tomato	endoplasmic reticulum, extracellular	21.37	50.0
Os09t0400000-00	Rice	plasma membrane	57.26	49.77
CDY63551	Canola	cytosol	8.71	49.25
KRH45566	Soybean	cytosol	39.31	48.85
PGSC0003DMT400024956	Potato	cytosol	15.04	47.5
Os11t0622800-00	Rice	cytosol	44.33	47.46
Os10t0194200-01	Rice	plasma membrane, plastid	44.33	47.46
VIT_00s0371g00070.t01	Wine grape	cytosol	44.06	45.75
VIT_00s0371g00020.t01	Wine grape	cytosol	6.6	45.45
Os02t0187800-01	Rice	cytosol	43.54	45.45
KRH49728	Soybean	cytosol	25.86	44.75
PGSC0003DMT400041571	Potato	cytosol	15.57	42.45
Solyc05g024320.1.1	Tomato	cytosol	22.69	40.57
VIT_18s0001g01160.t01	Wine grape	mitochondrion	16.62	39.13
PGSC0003DMT400043759	Potato	cytosol	6.33	26.97
HORVU2Hr1G099350.2	Barley	cytosol, mitochondrion	26.39	24.88

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	EntrezGene:4336968	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	EMBL:AK102452	ProteinID:BAF15762.1	ProteinID:BAS90969.1	ProteinID:CAE05206.3	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058
GO:GO:0009699	GO:GO:0009809	GO:GO:0009987	GO:GO:0016491	GO:GO:0019748	GO:GO:0045551
GO:GO:0046872	GO:GO:0052747	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os04g0612700
EnsemblPlants:Os04t0612700-01	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683
PANTHER:PTHR42683:SF10	UniProt:Q0JA75	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000021CA60
RefSeq:XP_015635610.1	SEG:seg	:	:	:	:

Description

FINE CULM 1Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195). (Os04t0612700-01)

Coordinates

chr4:+:31069629..31073727

Molecular Weight (calculated)

39568.6 Da

IEP (calculated)

7.288

GRAVY (calculated)

0.054

Length

379 amino acids

Sequence
(BLAST)

001: MAPTTTATAA AEQAPPPQHT RKAVGLAAHD DSGHLTPIRI SRRKTGDDDV AIKVLYCGIC HSDLHTIKNE WRNAVYPVVA GHEITGVVTE VGKNVARFKA
101: GDEVGVGCMV NTCGGCESCR DGCENYCSGG VVFTYNSVDR DGTRTYGGYS DAVVVSQRFV VRFPSSAGGG AGAALPLDSG APLLCAGVTV YAPMRQHGLC
201: EAGKHVGVVG LGGLGHVAVK FARAFGMRVT VISTSPVKRQ EALERLGADG FIVSTNASEM KAAMGTMHGI INTASASTSM HSYLALLKPK GKMILVGLPE
301: KPLQIPTFAL VGGGKILAGS CMGSISETQE MIDFAAEHGV AADIELIGAD EVNTAMERLA KGDVRYRFVV DIGNTLRSD

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.