CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99878	Soybean	cytosol	77.63	47.09
KRH07586	Soybean	cytosol	62.1	47.06
KRH45566	Soybean	cytosol	59.82	42.95
KRH74457	Soybean	cytosol	67.12	40.95
KRH74456	Soybean	cytosol	64.84	39.23
KRH45510	Soybean	cytosol	44.75	33.11
KRH39488	Soybean	cytosol	54.79	32.97
KRH43378	Soybean	cytosol	52.97	32.58
KRH59514	Soybean	cytosol	52.51	31.94
Zm00001d024314_P001	Maize	cytosol	51.6	31.48
TraesCS6A01G369800.1	Wheat	cytosol, golgi	52.05	31.23
TraesCS6A01G370100.1	Wheat	cytosol	50.68	31.18
TraesCS6B01G406000.1	Wheat	cytosol	52.05	31.15
TraesCS7A01G380100.1	Wheat	cytosol	52.05	30.98
TraesCS6B01G406300.1	Wheat	cytosol	51.6	30.96
TraesCS7B01G282100.1	Wheat	cytosol	52.05	30.81
TraesCS7D01G376600.1	Wheat	cytosol	51.6	30.71
TraesCS6D01G353300.1	Wheat	cytosol	51.14	30.68
Os08t0270400-00	Rice	cytosol	42.47	30.59
OQU80077	Sorghum	cytosol	52.05	30.56
TraesCS7B01G232400.1	Wheat	cytosol, plastid	52.05	30.24
TraesCS6B01G406200.1	Wheat	cytosol	50.23	30.05
TraesCS6D01G353700.1	Wheat	cytosol	50.23	30.05
TraesCS7A01G350500.1	Wheat	cytosol	50.68	29.92
TraesCS6D01G353400.1	Wheat	cytosol	50.23	29.89
Os09t0400300-01	Rice	plasma membrane	47.49	29.89
Os10t0430200-01	Rice	cytosol	49.77	29.78
Os09t0399800-01	Rice	cytosol	48.4	29.53
KRH39487	Soybean	cytosol	41.55	29.35
EER98869	Sorghum	cytosol	48.4	29.28
Os09t0400400-01	Rice	cytosol	48.4	29.28
EER96708	Sorghum	cytosol	47.95	29.17
Zm00001d020400_P001	Maize	plastid	48.4	29.04
TraesCS5D01G210600.1	Wheat	cytosol	47.03	28.93
TraesCS5B01G202700.1	Wheat	cytosol	47.03	28.93
TraesCS5D01G218100.2	Wheat	plastid	51.14	28.87
TraesCS5A01G213900.1	Wheat	plastid	51.14	28.79
TraesCS5B01G209800.2	Wheat	plastid	50.68	28.53
Os03t0223200-00	Rice	cytosol	49.77	28.53
KRH05985	Soybean	cytosol	47.03	28.45
TraesCS5A01G205700.1	Wheat	cytosol	46.12	28.37
TraesCS7D01G184500.1	Wheat	cytosol	46.12	28.29
KRH17471	Soybean	cytosol	46.12	27.98
TraesCS7D01G328300.1	Wheat	cytosol	51.6	27.56
KRG91021	Soybean	cytosol, nucleus	44.75	27.45
TraesCS7A01G183000.1	Wheat	cytosol	44.75	27.45
KRH35742	Soybean	cytosol, nucleus	44.75	27.37
TraesCS2A01G424600.1	Wheat	cytosol	46.12	27.37
OQU82308	Sorghum	cytosol	47.49	27.37
TraesCS2D01G422400.1	Wheat	cytosol	45.66	27.17
KRH10632	Soybean	cytosol	44.29	27.17
TraesCS2B01G444200.2	Wheat	cytosol	45.66	27.1
Zm00001d002346_P002	Maize	plastid	45.66	27.03
KRH21722	Soybean	cytosol	43.84	26.89
TraesCS5B01G202800.1	Wheat	plastid	51.14	26.6
TraesCS5A01G205600.1	Wheat	plastid	51.14	26.54
TraesCS5D01G210700.1	Wheat	plastid	50.68	26.37
TraesCS7D01G184600.1	Wheat	cytosol	24.2	26.24
OQU89465	Sorghum	plastid	49.77	26.08
Os04t0612700-01	Rice	cytosol	44.75	25.86
KRH45514	Soybean	cytosol	29.22	24.33
Os09t0400000-00	Rice	plasma membrane	47.95	24.08
Zm00001d020401_P001	Maize	cytosol	21.0	19.91
HORVU6Hr1G035410.1	Barley	cytosol	1.37	4.84
Zm00001d020402_P001	Maize	plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02004605	EnsemblPlants:KRH49728	EnsemblPlantsGene:GLYMA_07G175200	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	InterPro:ADH_N	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR42683
PANTHER:PTHR42683:SF27	PFAM:PF08240	ProteinID:KRH49728	ProteinID:KRH49728.1	SEG:seg	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI000295DFA9	UniProt:K7L2E0	MapMan:50.1.1	:	:

Description

hypothetical protein

Coordinates

chr7:-:31708295..31710475

Molecular Weight (calculated)

23517.4 Da

IEP (calculated)

9.581

GRAVY (calculated)

0.338

Length

219 amino acids

Sequence
(BLAST)

001: VRSCKSCQNC VNNVENHCQQ KILAYGAKYV DDTITYGGFS DFMVVDEHFV VSILSGLPLD VAAPFLGAGI TVYGPLRYFG LDKPNMHLGV VGLGGLGHLA
101: VKFAKALDLK VSVIISTSPN KKKKAIQHLG ADSFVAAVCT LDGIIDTISA MHPLTPLIDL LKSHGKLVMV GAPEKPLELL LPSLIMGRKT IAASYIGGVK
201: RHKKLLISPL NTMLDLKLR

Best Arabidopsis Sequence Match ( AT4G37970.1 )
(BLAST)

001: MERLSGEKEQ SVEAFGWAAR DSSGHLSPFV FSRRKTGEEE VRVKVLYCGI CHSDLHCLKN EWHSSIYPLV PGHEIIGEVS EIGNKVSKFN LGDKVGVGCI
101: VDSCRTCESC REDQENYCTK AIATYNGVHH DGTINYGGYS DHIVVDERYA VKIPHTLPLV SAAPLLCAGI SMYSPMKYFG LTGPDKHVGI VGLGGLGHIG
201: VRFAKAFGTK VTVVSSTTGK SKDALDTLGA DGFLVSTDED QMKAAMGTMD GIIDTVSASH SISPLIGLLK SNGKLVLLGA TEKPFDISAF SLILGRKSIA
301: GSGIGGMQET QEMIDFAAEH GIKAEIEIIS MDYVNTAMDR LAKGDVRYRF VIDISNTLAA TRS

Arabidopsis Description

CAD6Probable cinnamyl alcohol dehydrogenase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65621]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.