Factsheet for Bra033613.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39330.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56752	Canola	cytosol	100.0	100.0
CDX72704	Canola	cytosol	99.72	99.72
AT4G39330.1	Thale cress	cytosol	91.94	91.94
Bra031216.1-P	Field mustard	cytosol	83.33	83.8
PGSC0003DMT400047475	Potato	cytosol	79.44	79.44
VIT_04s0044g00210.t01	Wine grape	cytosol	78.89	79.11
KRH59514	Soybean	cytosol	78.33	78.33
KRH43378	Soybean	cytosol	76.39	77.25
Solyc03g078440.2.1	Tomato	cytosol	77.78	71.61
Solyc03g078430.1.1	Tomato	extracellular, plastid, vacuole	40.56	70.19
Bra010627.1-P	Field mustard	cytosol	60.0	64.09
Bra011799.1-P	Field mustard	cytosol	62.22	62.75
Bra010626.1-P	Field mustard	cytosol	59.44	61.85
EER98870	Sorghum	cytosol	16.39	60.2
Bra010625.1-P	Field mustard	cytosol	42.5	59.53
Bra011798.1-P	Field mustard	cytosol	58.61	58.29
Bra017639.1-P	Field mustard	cytosol	51.39	51.82
Bra011510.1-P	Field mustard	cytosol	50.83	51.26
Bra022425.1-P	Field mustard	cytosol	51.94	51.23
Bra016041.1-P	Field mustard	cytosol	49.44	50.28

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
EnsemblPlantsGene:Bra033613	EnsemblPlants:Bra033613.1	EnsemblPlants:Bra033613.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058
GO:GO:0009719	GO:GO:0009735	GO:GO:0009809	GO:GO:0009987	GO:GO:0016491	GO:GO:0019748
GO:GO:0045551	GO:GO:0046872	GO:GO:0048046	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M4EXS4
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683
PANTHER:PTHR42683:SF12	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI00018909F7	SEG:seg

Description

AT4G39330 (E=2e-176) ATCAD9, CAD9 | CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9); binding / catalytic/ oxidoreductase/ zinc ion binding

Coordinates

chrA06:-:26014759..26016170

Molecular Weight (calculated)

38864.9 Da

IEP (calculated)

6.595

GRAVY (calculated)

-0.080

Length

360 amino acids

Sequence
(BLAST)

001: MAKSPETEHP NKAFGWAAKD KSGVLSPFHF SRRDNGDNDV TVKILYCGVC HTDLHTIKND WGFSYYPVVP GHEIVGIATK VGKNVTKFRE GDRVGVGVIT
101: GSCQSCESCN QDLENYCPQM SFTYNSIGSD GTKTYGGYSE SIVVDQRFVL QFPEGLPSDS GAPLLCAGIT VYSPMKYYGM TEPGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSPSKE DEAINRLGAD SFLVSSDPQK MKAAIGTMDY IIDTVSAVHA LFPLLGLLKV NGKLVTLGLP EKPLELPIFP LVLGRKMVGG
301: SDIGGMKETQ EMLEFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.