Factsheet for Zm00001d004443_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10404	Sorghum	cytosol	87.53	87.29
TraesCS2D01G064900.1	Wheat	peroxisome	82.55	83.24
HORVU2Hr1G010840.1	Barley	peroxisome	82.27	82.96
TraesCS2A01G066500.1	Wheat	peroxisome	82.27	82.5
TraesCS2A01G066400.1	Wheat	peroxisome	82.27	82.5
Os04t0229100-01	Rice	cytosol	80.89	81.11
TraesCS2B01G078600.1	Wheat	cytosol	72.3	80.56
TraesCS2B01G078700.1	Wheat	cytosol	81.99	75.32
GSMUA_Achr5P11490_001	Banana	cytosol	71.19	71.79
VIT_18s0001g14910.t01	Wine grape	cytosol	69.81	70.0
HORVU2Hr1G010830.1	Barley	peroxisome	81.99	69.0
Solyc02g030480.2.1	Tomato	peroxisome	63.99	64.17
KRH17471	Soybean	cytosol	63.99	63.99
PGSC0003DMT400054502	Potato	peroxisome	63.71	63.89
PGSC0003DMT400033637	Potato	peroxisome	63.71	63.89
Solyc02g069250.2.1	Tomato	peroxisome	62.88	63.06
KRH05985	Soybean	cytosol	62.6	62.43
PGSC0003DMT400059621	Potato	cytosol	56.51	56.35
Zm00001d024314_P001	Maize	cytosol	55.96	56.27
Solyc08g014360.1.1	Tomato	plastid	56.23	53.42
Zm00001d020401_P001	Maize	cytosol	33.52	52.38
Zm00001d020400_P001	Maize	plastid	52.63	52.05
Zm00001d045043_P001	Maize	cytosol	49.31	50.28
Zm00001d002346_P002	Maize	plastid	51.52	50.27
Zm00001d015618_P001	Maize	extracellular	47.09	46.32
Zm00001d020402_P001	Maize	plastid	9.97	29.51
Zm00001d002250_P001	Maize	plastid	47.92	5.52

Protein Annotations

EntrezGene:100216819	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	UniProt:B4FJW4	EMBL:BT037402	EMBL:EU964548	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872
GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM18922.1	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR42683	PANTHER:PTHR42683:SF4	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI00017B7433	EnsemblPlantsGene:Zm00001d004443	EnsemblPlants:Zm00001d004443_P001	EnsemblPlants:Zm00001d004443_T001	SEG:seg

Description

Probable cinnamyl alcohol dehydrogenase 9

Coordinates

chr2:-:112231521..112233025

Molecular Weight (calculated)

38713.6 Da

IEP (calculated)

7.270

GRAVY (calculated)

0.048

Length

361 amino acids

Sequence
(BLAST)

001: MEVTPNHTLT VTGWAAMNES AGKVEPFVFK RRENGPDDVT IKVQYCGMCH TDLHFINNDW GITTYPLVPG HEITGVVTKA GRNVTGFRVG DRVGVGCIAA
101: SCLDCDHCRR SEENYCDRVA LTYNGVFWDG SVTYGGYSRA LVADKRFVVR VPDALPLDAA APLLCAGVTV YSPMKHHGML GHPGASLGVV GLGGLGHVAV
201: KLAKAFGLRV TVVSTSPAKE AEARARLGAD RFVVSTDDAQ MRDAARSLDY VIDTVSAKHS LGPILDLLKV SGKLVLVAAP DQPVELPSFP LIFGKRTVSG
301: SMTGGIRETQ EMLDLCARHN ITCDIELVST DGINAALARL ARNDVRYRFV IDIAGDSTSK L

Best Arabidopsis Sequence Match ( AT4G39330.1 )
(BLAST)

001: MAKSPETEHP NKVFGWGARD KSGVLSPFHF SRRDNGENDV TVKILFCGVC HTDLHTIKND WGYSYYPVVP GHEIVGIATK VGKNVTKFKE GDRVGVGVIS
101: GSCQSCESCD QDLENYCPQM SFTYNAIGSD GTKNYGGYSE NIVVDQRFVL RFPENLPSDS GAPLLCAGIT VYSPMKYYGM TEAGKHLGVA GLGGLGHVAV
201: KIGKAFGLKV TVISSSSTKA EEAINHLGAD SFLVTTDPQK MKAAIGTMDY IIDTISAVHA LYPLLGLLKV NGKLIALGLP EKPLELPMFP LVLGRKMVGG
301: SDVGGMKETQ EMLDFCAKHN ITADIELIKM DEINTAMERL AKSDVRYRFV IDVANSLSPP

Arabidopsis Description

CAD9Probable cinnamyl alcohol dehydrogenase 9 [Source:UniProtKB/Swiss-Prot;Acc:P42734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.