Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G32060.1 | CDY32970 | AT5G42980.1 | 15352244 |
| AT1G32060.1 | CDY43592 | AT5G42980.1 | 15352244 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59208 | Canola | plastid | 99.5 | 99.5 |
| CDY41745 | Canola | plastid | 97.73 | 96.76 |
| CDX84108 | Canola | plastid | 96.73 | 95.76 |
| AT1G32060.1 | Thale cress | plastid | 94.21 | 94.68 |
| CDY35538 | Canola | plastid | 70.28 | 87.46 |
| KRH74288 | Soybean | nucleus, plastid | 86.9 | 84.77 |
| KRH39632 | Soybean | nucleus, plastid | 86.9 | 84.77 |
| PGSC0003DMT400024090 | Potato | cytosol, extracellular, plastid | 86.15 | 84.44 |
| Solyc08g076220.2.1 | Tomato | plastid | 84.89 | 84.25 |
| VIT_02s0109g00080.t01 | Wine grape | plastid | 84.89 | 82.6 |
| CDY34172 | Canola | cytosol | 19.4 | 15.94 |
| CDY52697 | Canola | cytosol | 19.14 | 15.83 |
| CDY13403 | Canola | cytosol | 5.54 | 15.83 |
| CDY00155 | Canola | cytosol | 18.14 | 15.79 |
| CDY28487 | Canola | cytosol | 19.14 | 15.73 |
| CDY36391 | Canola | cytosol | 18.89 | 15.43 |
| CDY13688 | Canola | cytosol | 18.64 | 15.32 |
| CDX83666 | Canola | cytosol | 18.64 | 15.32 |
| CDY17380 | Canola | cytosol | 17.88 | 15.17 |
| CDY28618 | Canola | cytosol | 17.63 | 14.96 |
| CDX89330 | Canola | cytosol | 17.63 | 14.89 |
| CDY10528 | Canola | cytosol | 17.13 | 14.78 |
| CDY42388 | Canola | cytosol | 17.38 | 14.65 |
| CDY70621 | Canola | plastid | 4.79 | 14.62 |
| CDY50103 | Canola | cytosol | 12.09 | 14.59 |
| CDX73515 | Canola | cytosol | 5.54 | 12.72 |
| CDX97201 | Canola | cytosol | 2.27 | 12.0 |
| CDY07890 | Canola | cytosol | 2.77 | 11.58 |
| CDX75814 | Canola | endoplasmic reticulum, extracellular | 2.02 | 11.11 |
| CDX67576 | Canola | plastid | 8.06 | 11.07 |
| CDY59158 | Canola | plastid | 7.81 | 10.76 |
| CDY54029 | Canola | plastid | 7.81 | 10.73 |
| CDY54439 | Canola | cytosol | 2.52 | 10.53 |
| CDY70546 | Canola | cytosol | 2.52 | 10.53 |
| CDX94369 | Canola | cytosol, plastid, vacuole | 3.27 | 10.48 |
| CDY20046 | Canola | cytosol | 18.39 | 8.43 |
| CDY07735 | Canola | plastid | 5.54 | 8.06 |
| CDX94320 | Canola | cytosol | 17.38 | 7.93 |
| CDY72083 | Canola | cytosol | 1.26 | 7.81 |
| CDY07734 | Canola | plastid | 1.51 | 7.69 |
| CDX89329 | Canola | cytosol | 1.01 | 1.12 |
Protein Annotations
| KEGG:00710+2.7.1.19 | MapMan:1.2.11 | Gene3D:3.40.50.300 | GO:A0A078GC16 | UniProt:A0A078GC16 | EnsemblPlants:CDY22582 |
| ProteinID:CDY22582 | ProteinID:CDY22582.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008974 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00019212001 | InterPro:P-loop_NTPase | PFAM:PF00485 |
| PRINTS:PR00478 | InterPro:PRK | InterPro:PRK/URK | ScanProsite:PS00567 | PANTHER:PTHR10285 | PANTHER:PTHR10285:SF120 |
| MetaCyc:PWY-5723 | SUPFAM:SSF52540 | UniPathway:UPA00116 | UniParc:UPI0004EE274E | SEG:seg | : |
Description
BnaC05g24200DPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A078GC16]
Coordinates
chrLK032133:+:298912..300870
Molecular Weight (calculated)
44419.9 Da
IEP (calculated)
5.484
GRAVY (calculated)
-0.284
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSTIYSTQ ALNSTHFLTS SPSSSSKQVF FYRRQTNRRF NTIITCAAQQ TVVIGLAADS GCGKSTFMRR LTSVFGGAAE PPKGGNPDSN TLISDMTTVI
101: CLDDYHSLDR TGRKEKGVTA LDPRANDFDL MYEQVKALKS GIAVEKPIYN HVTGLLDAPE LIQPPKILVI EGLHPMFDER VRDLLDFSIY LDISNEVKFA
201: WKIQRDMAER GHSLESIKAS IEARKPDFDA FIDPQKQYAD AVIEVLPTQL IPDDNEGKVL RVRLIMKEGV KYFSPVYLFD EGSTISWIPC GRKLTCSYPG
301: IKFNYQPDSY FDNEVSVVEM DGQFDRLDEL IYVESHLSNL STKFYGEVTQ QMLKHADFPG SNNGTGLFQT IVGLKIRDLY EQLIANKANA PTEASKA
101: CLDDYHSLDR TGRKEKGVTA LDPRANDFDL MYEQVKALKS GIAVEKPIYN HVTGLLDAPE LIQPPKILVI EGLHPMFDER VRDLLDFSIY LDISNEVKFA
201: WKIQRDMAER GHSLESIKAS IEARKPDFDA FIDPQKQYAD AVIEVLPTQL IPDDNEGKVL RVRLIMKEGV KYFSPVYLFD EGSTISWIPC GRKLTCSYPG
301: IKFNYQPDSY FDNEVSVVEM DGQFDRLDEL IYVESHLSNL STKFYGEVTQ QMLKHADFPG SNNGTGLFQT IVGLKIRDLY EQLIANKANA PTEASKA
001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA
Arabidopsis Description
PRKPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.