CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002854.1-P	Field mustard	cytosol	99.7	70.09
CDY17380	Canola	cytosol	99.7	70.09
CDY28618	Canola	cytosol	99.39	69.87
Solyc10g005880.2.1	Tomato	cytosol	89.36	69.67
Solyc07g065890.2.1	Tomato	cytosol, plastid	89.36	65.92
CDX89330	Canola	cytosol	92.71	64.89
KRG98430	Soybean	cytosol	92.1	63.52
KRH46433	Soybean	cytosol	91.79	63.31
KRH14188	Soybean	cytosol, nucleus	91.79	63.18
CDY42388	Canola	cytosol	90.27	63.06
PGSC0003DMT400037253	Potato	cytosol	89.06	62.74
KRH73945	Soybean	cytosol	90.58	62.74
VIT_19s0015g01730.t01	Wine grape	cytosol	90.88	62.42
CDY10528	Canola	cytosol	86.93	62.17
GSMUA_AchrUn_...	Banana	cytosol	85.41	61.35
CDY70546	Canola	cytosol	17.63	61.05
CDY07890	Canola	cytosol	17.63	61.05
GSMUA_Achr4P15950_001	Banana	cytosol	86.32	60.55
CDY54439	Canola	cytosol	17.33	60.0
GSMUA_Achr8P34310_001	Banana	cytosol	85.11	59.83
KXG24145	Sorghum	cytosol	82.98	57.84
CDY28487	Canola	cytosol	82.98	56.52
Os11t0265000-01	Rice	cytosol	84.19	56.42
CDY13688	Canola	cytosol	82.67	56.31
CDX83666	Canola	cytosol	82.67	56.31
TraesCS4A01G213800.1	Wheat	cytosol	83.59	56.24
TraesCS4B01G102200.1	Wheat	cytosol	83.59	56.24
TraesCS4D01G098900.1	Wheat	cytosol	83.59	56.24
CDY34172	Canola	cytosol	82.37	56.11
CDY52697	Canola	cytosol	81.16	55.62
CDY00155	Canola	cytosol	76.9	55.48
CDY36391	Canola	cytosol	81.16	54.94
HORVU4Hr1G043970.12	Barley	cytosol	79.94	53.13
Zm00001d054105_P012	Maize	cytosol	82.67	49.63
CDX97201	Canola	cytosol	11.25	49.33
KXG29238	Sorghum	mitochondrion	84.19	46.4
CDX75814	Canola	endoplasmic reticulum, extracellular	8.51	38.89
CDX94320	Canola	cytosol	89.97	34.02
CDX73515	Canola	cytosol	15.5	29.48
CDY20046	Canola	cytosol	77.2	29.33
CDY70621	Canola	plastid	8.51	21.54
CDY54029	Canola	plastid	17.93	20.42
CDY59158	Canola	plastid	17.02	19.44
CDX67576	Canola	plastid	16.72	19.03
CDY13403	Canola	cytosol	5.78	13.67
CDX94369	Canola	cytosol, plastid, vacuole	4.86	12.9
CDY41745	Canola	plastid	14.89	12.22
CDX84108	Canola	plastid	14.89	12.22
CDY22582	Canola	plastid	14.59	12.09
CDY59208	Canola	plastid	14.59	12.09
CDY07735	Canola	plastid	9.42	11.36
CDY35538	Canola	plastid	8.21	8.46
CDY72083	Canola	cytosol	1.52	7.81
CDY07734	Canola	plastid	0.3	1.28
CDX89329	Canola	cytosol	1.22	1.12

Protein Annotations

KEGG:00240+2.4.2.9+2.7.1.48	KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	Gene3D:3.40.50.2020	Gene3D:3.40.50.300	MapMan:6.2.2.1
GO:A0A078IM48	UniProt:A0A078IM48	EnsemblPlants:CDY50103	ProteinID:CDY50103	ProteinID:CDY50103.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00095904001	InterPro:P-loop_NTPase	PFAM:PF00485	PFAM:PF14681	PRINTS:PR00988	InterPro:PRK/URK
InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF97	MetaCyc:PWY-7183	MetaCyc:PWY-7193
SUPFAM:SSF52540	SUPFAM:SSF53271	UniPathway:UPA00574	UniPathway:UPA00579	UniParc:UPI0004EEFB9B	InterPro:Uridine_kinase-like
SEG:seg	:	:	:	:	:

Description

BnaC01g43510DBnaC01g43510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IM48]

Coordinates

chrLK032881:-:18213..20041

Molecular Weight (calculated)

37051.2 Da

IEP (calculated)

7.342

GRAVY (calculated)

-0.058

Length

329 amino acids

Sequence
(BLAST)

001: MIWQVNPSDV ILLEGILLFH DPRVRGLMNM KIFVDTDADV RLARRIKRDT SQNDRDIGTV LDQYSKFVKP AFDDFILPTK KYADIIIPRG GDNHVAIDLI
101: VQHICTKLGQ HDLCKIYPNL YVIQSTFQIR GMHTLIRDSQ TTKHDFVFYS DRLIRLVVEH GLGHLPFSEM QVITPTGSVY SGVDFCKRLC GVSVIRSGES
201: MENALRACCK GIKIGKILIH REGDNGQQLV YEKLPNDISE RHVLLLDPIL GTGNSAVQAI KLLISKGVPE GNIIFLNLIS APQGVHVVCK KFPRLKIVTS
301: EIEHGLNEEF RVIPGMGEFG DRYFGTDDD

Best Arabidopsis Sequence Match ( AT1G55810.6 )
(BLAST)

001: MASKSDVNII ETSSKVHFSG FHQMDGLASN RPEQMAEEEE HGQPFVIGVA GGAASGKTTV CDMIMQQLHD QRAVVVNQDS FYHNVNEVEL VRVHDYNFDH
101: PDAFDTEQLL SSMEKLRKGQ AVDIPNYDFK SYKNNVFPPR RVNPSDVIIL EGILIFHDPR VRDLMNMKIF VDADADVRLA RRIKRDTVEK GRDIATVLDQ
201: YSKFVKPAFE DFILPTKKYA DIIIPRGGDN HVAIDLIVQH IHTKLGQHDL CKIYPNLYVI QSTFQIRGMH TLIRDSKTTK HDFIFYSDRL IRLVVEHGLG
301: HLPFTEKQVV TPTGSVYSGV DFCKKLCGVS VIRSGESMEN ALRACCKGIK IGKILIHREG DNGQQLIYEK LPSDISERHV LLLDPILGTG NSAVQAIRLL
401: ISKGVPESNI IFLNLISAPE GVNVVCKKFP RIKIVTSEIE LGLNDEFRVV PGMGEFGDRY FGTDDE

Arabidopsis Description

UKL3uridine kinase-like 3 [Source:TAIR;Acc:AT1G55810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.