CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70546	Canola	cytosol	69.33	54.74
CDY54439	Canola	cytosol	69.33	54.74
CDY07890	Canola	cytosol	66.67	52.63
CDX75814	Canola	endoplasmic reticulum, extracellular	22.67	23.61
CDY50103	Canola	cytosol	49.33	11.25
CDX73515	Canola	cytosol	25.33	10.98
CDY00155	Canola	cytosol	64.0	10.53
CDX89330	Canola	cytosol	53.33	8.51
CDY17380	Canola	cytosol	50.67	8.12
CDY28618	Canola	cytosol	50.67	8.12
CDX83666	Canola	cytosol	50.67	7.87
CDY13688	Canola	cytosol	50.67	7.87
CDY52697	Canola	cytosol	49.33	7.71
CDY28487	Canola	cytosol	49.33	7.66
CDY34172	Canola	cytosol	49.33	7.66
CDY36391	Canola	cytosol	49.33	7.61
CDY10528	Canola	cytosol	46.67	7.61
CDY42388	Canola	cytosol	46.67	7.43
CDY54029	Canola	plastid	26.67	6.92
CDY59158	Canola	plastid	25.33	6.6
CDX67576	Canola	plastid	24.0	6.23
CDY20046	Canola	cytosol	65.33	5.66
CDX94320	Canola	cytosol	46.67	4.02
CDY35538	Canola	plastid	12.0	2.82
CDY22582	Canola	plastid	12.0	2.27
CDY59208	Canola	plastid	12.0	2.27
CDY41745	Canola	plastid	12.0	2.24
CDX84108	Canola	plastid	12.0	2.24
CDY07735	Canola	plastid	6.67	1.83
CDX94369	Canola	cytosol, plastid, vacuole	2.67	1.61
CDY72083	Canola	cytosol	1.33	1.56
CDX89329	Canola	cytosol	4.0	0.84
CDY70621	Canola	plastid	1.33	0.77
CDY13403	Canola	cytosol	0.0	0.0
CDY07734	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDX97201	EnsemblPlantsGene:GSBRNA2T00104199001	Gene3D:3.40.50.2020	GO:A0A078E7K5	InterPro:PRTase-like	KEGG:00240+2.4.2.9+2.7.1.48
KEGG:00983+2.7.1.48	MetaCyc:PWY-7183	MetaCyc:PWY-7193	PANTHER:PTHR10285	PANTHER:PTHR10285:SF75	PFAM:PF14681
ProteinID:CDX97201	ProteinID:CDX97201.1	SUPFAM:SSF53271	UniParc:UPI0004EEFD8C	UniPathway:UPA00574	UniPathway:UPA00579
MapMan:50.2.4	:	:	:	:	:

Description

BnaC09g44240D

Coordinates

chrLK031897:+:1156381..1159953

Molecular Weight (calculated)

8491.2 Da

IEP (calculated)

6.066

GRAVY (calculated)

-0.361

Length

75 amino acids

Sequence
(BLAST)

1: MCQHCNDIFS QKKNIVMILY SEPQGIHGLC KKHPMVKIMT SEIDASLSED SLVIPGLGEF ADHYFGTDNS KKYQE

Best Arabidopsis Sequence Match ( AT3G27440.3 )
(BLAST)

001: MIMSQLHDQR VVLVNQDSFY HSLTKEKLNK VHEYNFDHPD AFNTEVLLSC MEKLRSGQPV NIPSYDFKIH QSIESSSPVN PGDVIILEGI LVLNDPRVRD
101: LMNMKIFVDT DADVRLSRRI QRDTVERGRN IQNVLEQYTK FVKPSFDEYI QPSMKYADII IPRGGDNDVA IDLIVQHIRT KLCQHNLCKI YSNIFIISST
201: FQIKGMHTLI RDINTTKHDF VFYADRLIRL VVEHGLGHLP FTEKQITTPT GSVYTGVDFC KRLCGVSVIR SGESMENALR ACCNGIKIGK ILIHRENNDG
301: RQLIYEKLPK DISSRHVFLL DPVLASGYSA VKAITLLLSK GVPESHIIFL NLIAAPQGIH ALCKKFPMLK IVTSEIDSSL NEDSRVIPGL GEFADRYFGT
401: NNINSKVSSL STNLKLRS

Arabidopsis Description

UKL5Uridine kinase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.