Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70621 | Canola | plastid | 51.45 | 68.46 |
| VIT_08s0007g01100.t01 | Wine grape | cytosol | 83.24 | 63.44 |
| CDY54029 | Canola | plastid | 98.84 | 59.17 |
| Bra007034.1-P | Field mustard | plastid | 98.84 | 58.76 |
| CDY59158 | Canola | plastid | 96.53 | 57.99 |
| CDX67576 | Canola | plastid | 95.38 | 57.09 |
| AT3G53900.2 | Thale cress | plastid | 93.06 | 54.39 |
| KRH75660 | Soybean | plastid | 81.5 | 49.3 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 75.72 | 48.7 |
| Solyc09g011300.2.1 | Tomato | plastid | 79.77 | 48.25 |
| Zm00001d024109_P001 | Maize | cytosol | 63.01 | 47.81 |
| PGSC0003DMT400022940 | Potato | cytosol | 35.84 | 47.69 |
| KXG25691 | Sorghum | cytosol | 65.9 | 46.15 |
| Os05t0455700-02 | Rice | plastid | 72.83 | 41.86 |
| TraesCS1D01G280900.1 | Wheat | plastid | 69.94 | 41.02 |
| TraesCS1A01G281700.1 | Wheat | plastid | 69.94 | 41.02 |
| TraesCS1B01G290800.1 | Wheat | plastid | 69.36 | 40.68 |
| KRH65897 | Soybean | plastid | 81.5 | 38.74 |
| HORVU1Hr1G072750.2 | Barley | plasma membrane | 69.94 | 38.05 |
| CDY07890 | Canola | cytosol | 14.45 | 26.32 |
| CDY70546 | Canola | cytosol | 14.45 | 26.32 |
| CDX97201 | Canola | cytosol | 10.98 | 25.33 |
| CDY54439 | Canola | cytosol | 13.29 | 24.21 |
| CDY07735 | Canola | plastid | 28.32 | 17.95 |
| CDX75814 | Canola | endoplasmic reticulum, extracellular | 6.94 | 16.67 |
| CDY72083 | Canola | cytosol | 5.78 | 15.62 |
| CDY50103 | Canola | cytosol | 29.48 | 15.5 |
| CDX94369 | Canola | cytosol, plastid, vacuole | 9.83 | 13.71 |
| CDY00155 | Canola | cytosol | 30.64 | 11.62 |
| CDY17380 | Canola | cytosol | 29.48 | 10.9 |
| CDY28618 | Canola | cytosol | 29.48 | 10.9 |
| CDX89330 | Canola | cytosol | 29.48 | 10.85 |
| CDX83666 | Canola | cytosol | 30.06 | 10.77 |
| CDY13688 | Canola | cytosol | 30.06 | 10.77 |
| CDY34172 | Canola | cytosol | 29.48 | 10.56 |
| CDY28487 | Canola | cytosol | 29.48 | 10.56 |
| CDY52697 | Canola | cytosol | 28.9 | 10.42 |
| CDY36391 | Canola | cytosol | 28.9 | 10.29 |
| CDY42388 | Canola | cytosol | 26.01 | 9.55 |
| CDY10528 | Canola | cytosol | 24.28 | 9.13 |
| CDY20046 | Canola | cytosol | 31.21 | 6.24 |
| CDX94320 | Canola | cytosol | 28.9 | 5.75 |
| CDY59208 | Canola | plastid | 12.72 | 5.54 |
| CDY22582 | Canola | plastid | 12.72 | 5.54 |
| CDX84108 | Canola | plastid | 12.14 | 5.24 |
| CDY41745 | Canola | plastid | 12.14 | 5.24 |
| CDY13403 | Canola | cytosol | 2.31 | 2.88 |
| CDY35538 | Canola | plastid | 5.2 | 2.82 |
| CDX89329 | Canola | cytosol | 2.31 | 1.12 |
| CDY07734 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX73515 | EnsemblPlantsGene:GSBRNA2T00109036001 | Gene3D:3.40.50.2020 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009116 | GO:GO:0009987 | InterPro:PRTase-like | InterPro:PRibTrfase_dom | PANTHER:PTHR10285 | PANTHER:PTHR10285:SF46 |
| PFAM:PF14681 | ProteinID:CDX73515 | ProteinID:CDX73515.1 | SUPFAM:SSF53271 | UniParc:UPI0004EF11D6 | MapMan:6.2.2.2 |
Description
BnaC08g24880D
Coordinates
chrLK031799:+:919941..921214
Molecular Weight (calculated)
18622.7 Da
IEP (calculated)
4.664
GRAVY (calculated)
0.176
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MYEASREWLP TVVGEIMSPM GAASVEFIDP REPIAVVPIL RAGLALAEHA STVLPANKIY HLGISRDEET LLPSVYLNKL PDEFPENSRV FLVDPMLATG
101: GTIVAAMDLL KERGLSVQQI KVICAVAAPP ALSKLNEKYP GLHVYTGIID PQVNEKGFII PGLGDAGDRS FGT
101: GTIVAAMDLL KERGLSVQQI KVICAVAAPP ALSKLNEKYP GLHVYTGIID PQVNEKGFII PGLGDAGDRS FGT
001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK
Arabidopsis Description
UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.