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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003159.1-P Field mustard plastid 71.62 94.22
CDX73515 Canola cytosol 54.39 93.06
CDY70621 Canola plastid 39.86 90.77
CDY59158 Canola plastid 85.47 87.85
CDX67576 Canola plastid 85.14 87.2
CDY54029 Canola plastid 84.46 86.51
Bra007034.1-P Field mustard plastid 84.8 86.25
PGSC0003DMT400022940 Potato cytosol 34.8 79.23
VIT_08s0007g01100.t01 Wine grape cytosol 59.46 77.53
KRH75660 Soybean plastid 64.19 66.43
Solyc09g011300.2.1 Tomato plastid 62.84 65.03
GSMUA_Achr10P... Banana cytosol, plasma membrane, plastid 57.77 63.57
Zm00001d024109_P001 Maize cytosol 45.27 58.77
KXG25691 Sorghum cytosol 47.3 56.68
TraesCS1A01G281700.1 Wheat plastid 56.42 56.61
TraesCS1D01G280900.1 Wheat plastid 56.42 56.61
TraesCS1B01G290800.1 Wheat plastid 56.08 56.27
Os05t0455700-02 Rice plastid 55.74 54.82
KRH65897 Soybean plastid 66.22 53.85
HORVU1Hr1G072750.2 Barley plasma membrane 56.76 52.83
AT3G27440.1 Thale cress cytosol 24.32 15.48
AT5G40870.1 Thale cress cytosol, plastid 24.66 15.02
AT3G27190.1 Thale cress cytosol 23.31 14.29
AT4G26510.2 Thale cress cytosol 21.28 13.43
AT1G55810.5 Thale cress cytosol 20.27 12.3
AT1G32060.1 Thale cress plastid 10.47 7.85
Protein Annotations
KEGG:00240+2.4.2.9Gene3D:3.40.50.2020MapMan:6.2.2.2EntrezGene:824557UniProt:A0A178VJX7ProteinID:AEE79156.1
ProteinID:AEE79157.1ArrayExpress:AT3G53900EnsemblPlantsGene:AT3G53900RefSeq:AT3G53900TAIR:AT3G53900RefSeq:AT3G53900-TAIR-G
EnsemblPlants:AT3G53900.2TAIR:AT3G53900.2EMBL:AY056189EMBL:AY084756EMBL:AY113998Unigene:At.20036
ProteinID:CAB88352.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004845GO:GO:0004849
GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0006139GO:GO:0006206GO:GO:0006223GO:GO:0006950GO:GO:0007154
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009116GO:GO:0009507GO:GO:0009536
GO:GO:0009570GO:GO:0009605GO:GO:0009987GO:GO:0009991GO:GO:0016036GO:GO:0016301
GO:GO:0016740GO:GO:0016757GO:GO:0032502GO:GO:0043097GO:GO:0044206RefSeq:NP_190958.1
RefSeq:NP_850699.1ProteinID:OAP06677.1PFAM:PF14681PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007131PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
InterPro:PRTase-likeInterPro:PRibTrfase_domPANTHER:PTHR10285PANTHER:PTHR10285:SF46UniProt:Q9M336SUPFAM:SSF53271
TIGRFAMs:TIGR01091UniParc:UPI0000048854Symbol:UPPInterPro:Ura_phspho_transSEG:seg:
Description
UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
Coordinates
chr3:-:19956590..19959075
Molecular Weight (calculated)
32197.2 Da
IEP (calculated)
9.247
GRAVY (calculated)
0.015
Length
296 amino acids
Sequence
(BLAST)
001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.