Factsheet for PGSC0003DMT400022940

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70621	Canola	plastid	71.54	71.54
VIT_08s0007g01100.t01	Wine grape	cytosol	80.0	45.81
Solyc09g011300.2.1	Tomato	plastid	98.46	44.76
Bra003159.1-P	Field mustard	plastid	76.15	44.0
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	80.0	38.66
KRH75660	Soybean	plastid	80.77	36.71
CDX73515	Canola	cytosol	47.69	35.84
CDY54029	Canola	plastid	77.69	34.95
AT3G53900.2	Thale cress	plastid	79.23	34.8
Bra007034.1-P	Field mustard	plastid	77.69	34.71
Zm00001d024109_P001	Maize	cytosol	60.77	34.65
TraesCS1A01G281700.1	Wheat	plastid	78.46	34.58
TraesCS1B01G290800.1	Wheat	plastid	78.46	34.58
TraesCS1D01G280900.1	Wheat	plastid	78.46	34.58
CDX67576	Canola	plastid	76.15	34.26
CDY59158	Canola	plastid	75.38	34.03
KXG25691	Sorghum	cytosol	64.62	34.01
Os05t0455700-02	Rice	plastid	76.92	33.22
HORVU1Hr1G072750.2	Barley	plasma membrane	79.23	32.39
KRH65897	Soybean	plastid	82.31	29.4
PGSC0003DMT400017925	Potato	cytosol	19.23	7.0
PGSC0003DMT400067208	Potato	cytosol, plastid	25.38	6.8
PGSC0003DMT400037253	Potato	cytosol	20.0	5.57
PGSC0003DMT400024090	Potato	cytosol, extracellular, plastid	10.77	3.46

Protein Annotations

Gene3D:3.40.50.2020	MapMan:6.2.2.2	ProteinID:AGE44324	ProteinID:AGE44324.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004845	GO:GO:0006139	GO:GO:0006223	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009116	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	EMBL:JX856130	UniProt:M1AHH2
PFAM:PF14681	EnsemblPlantsGene:PGSC0003DMG400008888	PGSC:PGSC0003DMG400008888	EnsemblPlants:PGSC0003DMT400022940	InterPro:PRTase-like	PANTHER:PTHR10285
PANTHER:PTHR10285:SF46	SUPFAM:SSF53271	UniParc:UPI0002951121	:	:	:

Description

Uracil phosphoribosyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400008888]

Coordinates

chr9:-:1300722..1305212

Molecular Weight (calculated)

14425.7 Da

IEP (calculated)

6.957

GRAVY (calculated)

0.036

Length

130 amino acids

Sequence
(BLAST)

001: MATENKVISG DRMLVFVPPH PLIKHWVSVL RNEQTPCPVF KNAMAELGRL LLYEASRDWL PTITGEIQSP MGIASVEFVD PREPVAIVPI LRAGLALAEH
101: ATSILPATKT YHLGLSRNEE TLQPSVYLNK

Best Arabidopsis Sequence Match ( AT3G53900.2 )
(BLAST)

001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK

Arabidopsis Description

UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.